RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
CBX3-202ENST00000396386 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
CBX3-202ENST00000396386 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
CBX3-202ENST00000396386 PAGE4O60829 102 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 RHOBP62745 196 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CBX3-202ENST00000396386 CD69Q07108 199 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 C10orf55Q5SWW7 151 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 SLC16A13Q7RTY0 426 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 MOB3BQ86TA1 216 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PNKDQ8N490 385 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 RPEQ96AT9 228 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 OR4F4Q96R69 305 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 SMIM7Q9BQ49 75 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 SSBP3Q9BWW4 388 aaPredicted RBP12.06□□□□□ -0.48
CBX3-202ENST00000396386 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 CGB1A6NKQ9 187 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 CXorf1O96002 111 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 STAG3L3P0CL85 134 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PRR20EP86478 221 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PRR20CP86479 221 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PRR20DP86480 221 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PRR20BP86481 221 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 PRR20AP86496 221 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 RNF212Q495C1 297 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 MRPL41Q8IXM3 137 aaKnown RBP12.06□□□□□ -0.48
CBX3-202ENST00000396386 SLC35E1Q96K37 410 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 UBTD1Q9HAC8 227 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 SDF2L1Q9HCN8 221 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 NAT8Q9UHE5 227 aa12.06□□□□□ -0.48
CBX3-202ENST00000396386 SETXQ7Z333 2677 aaKnown RBP12.05□□□□□ -0.48
CBX3-202ENST00000396386 A0A1W2PPR1 153 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 E7EUB6 86 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 M0R1W7 72 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
CBX3-202ENST00000396386 SUB1P53999 127 aaKnown RBP eCLIP12.05□□□□□ -0.486e-13■■■■■ 133.3
CBX3-202ENST00000396386 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 CYP2G1PQ6ZSU1 146 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 MMD2Q8IY49 270 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 FAM24BQ8N5W8 94 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 RNASEH2CQ8TDP1 164 aaKnown RBP12.05□□□□□ -0.48
CBX3-202ENST00000396386 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 RITA1Q96K30 269 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
CBX3-202ENST00000396386 C11orf94C9JXX5 98 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 RAB5AP20339 215 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 MAS1LP35410 378 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 RAB5BP61020 215 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 GAMTQ14353 236 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 PRSS8Q16651 343 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 ZNF674Q2M3X9 581 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 SPNS3Q6ZMD2 512 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 ABHD5Q8WTS1 349 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 RPUSD4Q96CM3 377 aaKnown RBP12.04□□□□□ -0.48
CBX3-202ENST00000396386 YPEL4Q96NS1 127 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 PARLQ9H300 379 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 COL6A6A6NMZ7 2263 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 TNCP24821 2201 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 C1orf196B1AJZ1 125 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 LINC00869P0C866 280 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 OR10J1P30954 320 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 CDKN1AP38936 164 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 GPR6P46095 362 aaPredicted RBP12.04□□□□□ -0.48
CBX3-202ENST00000396386 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
CBX3-202ENST00000396386 MALRD1Q5VYJ5 2156 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 A6NNC1 897 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 LY6LH3BQJ8 138 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 PDE6DO43924 150 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 ACTL6BO94805 426 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 MT-CO2P00403 227 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 CRYGBP07316 175 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 CTRB1P17538 263 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 RPL27AP46776 148 aaKnown RBP12.03□□□□□ -0.48
CBX3-202ENST00000396386 PSG5Q15238 335 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 TNXAQ16473 311 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 TPTE2P1Q5T6R2 138 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 CTRB2Q6GPI1 263 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 NANPQ8TBE9 248 aa12.03□□□□□ -0.48
CBX3-202ENST00000396386 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
CBX3-202ENST00000396386 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.48
CBX3-202ENST00000396386 IGKV1OR2-108A0A075B7D4 117 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 F6UZH7 168 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 CNTFRP26992 372 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 UBE2G2P60604 165 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 ARF6P62330 175 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 CST9LP1Q5W188 147 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 TXNDC17Q9BRA2 123 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 SIGLEC9Q9Y336 463 aa12.02□□□□□ -0.48
CBX3-202ENST00000396386 C19orf84I3L1E1 186 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 HTR1DP28221 377 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 GCHFRP30047 84 aa12.02□□□□□ -0.49
CBX3-202ENST00000396386 ATP5G3P48201 142 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms