RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 RNASE8Q8TDE3 154 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 MS4A10Q96PG2 267 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 TRBV20OR9-2A0A075B6H5 130 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 RBX1P62877 108 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 COTL1Q14019 142 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 C1orf185Q5T7R7 199 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 MRPL52Q86TS9 123 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 STPG3Q8N7X2 389 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 SSMEM1Q8WWF3 244 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 SFRP2Q96HF1 295 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 RAI1Q7Z5J4 1906 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 TIMP3P35625 211 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 RPL15P61313 204 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 RHOBP62745 196 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 EFNB3Q15768 340 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 TMEM30BQ3MIR4 351 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 DUX4L9Q6RFH8 374 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 LYG1Q8N1E2 194 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 ZCCHC14Q8WYQ9 949 aaKnown RBP13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 GAFA1Q96PS6 74 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 MIEN1Q9BRT3 115 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 TMEM204Q9BSN7 226 aa13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 AURKAIP1Q9NWT8 199 aaPredicted RBP13.1□□□□□ -0.31
CCHCR1-202ENST00000396263 IGF2RP11717 2491 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 CA2P00918 260 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 GCHFRP30047 84 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 TNFAIP6P98066 277 aaPredicted RBP13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 RAB31Q13636 194 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 PLCE1Q9P212 2302 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 PTPRQQ9UMZ3 2332 aa13.09□□□□□ -0.31
CCHCR1-202ENST00000396263 SCO2A0A1W2PP80 73 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 PGPEP1LA6NFU8 196 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 IGHV1-46P01743 117 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 SELENOVP59797 346 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 CORO2AQ92828 525 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 SFXN3Q9BWM7 321 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 PRNDQ9UKY0 176 aa13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 YTHDF2Q9Y5A9 579 aaKnown RBP13.08□□□□□ -0.31
CCHCR1-202ENST00000396263 MDFIC2A0A1B0GVS7 189 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 PRR20EP86478 221 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 PRR20CP86479 221 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 PRR20DP86480 221 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 PRR20BP86481 221 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 PRR20AP86496 221 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 C11orf42Q8N5U0 333 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 ZNF257Q9Y2Q1 563 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 PPIAL4AQ9Y536 164 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
CCHCR1-202ENST00000396263 A0A0U1RQK1 487 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 ZNF320A2RRD8 509 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 C11orf52Q96A22 123 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 C20orf144Q9BQM9 153 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 PAM16Q9Y3D7 125 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 MT-CO2P00403 227 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 SPATA31B1PQ5VZV4 182 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 SLC25A48Q6ZT89 311 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 ICE1Q9Y2F5 2266 aa13.07□□□□□ -0.32
CCHCR1-202ENST00000396263 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 TPTE2P1Q5T6R2 138 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 Q6ZWC4 215 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 SGMS2Q8NHU3 365 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 ABHD17AQ96GS6 310 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 CCL13Q99616 98 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 RPUSD1Q9UJJ7 312 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 PIEZO2Q9H5I5 2752 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 K7ENP7 123 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 UPK2O00526 184 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 IGFBP2P18065 325 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 TNFSF4P23510 183 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 CEACAM8P31997 349 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 SAPCD1Q5SSQ6 148 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 TEX36Q5VZQ5 186 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 DEFB108BQ8NET1 73 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 OCC1Q8TAD7 63 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 PLEKHA3Q9HB20 300 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 TRAPPC1Q9Y5R8 145 aa13.06□□□□□ -0.32
CCHCR1-202ENST00000396263 DYSFO75923 2080 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 J3QR06 171 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 LINC00869P0C866 280 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 CT45A6P0DMU7 189 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 CT45A5P0DMU8 189 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 CT45A7P0DMV0 189 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 MYOD1P15172 320 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 RPL31P62899 125 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 SLC25A10Q9UBX3 287 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 C9JCJ5 164 aa13.05□□□□□ -0.32
CCHCR1-202ENST00000396263 MMP23AO75900 390 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms