RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SLC25A17O43808 307 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 CGAP01215 116 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 COX7A1P24310 79 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 CYP2G1PQ6ZSU1 146 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF524Q96C55 264 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 RNF126Q9BV68 326 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 NSD1Q96L73 2696 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 RAI1Q7Z5J4 1906 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 HLA-DQA1P01909 254 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM177Q53S58 311 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 RAB24Q969Q5 203 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 NPFFR1Q9GZQ6 430 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 A0A087WWC5 75 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ERVS71-1P61550 626 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ARL16Q0P5N6 197 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 UBTD1Q9HAC8 227 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 RPRMQ9NS64 109 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1W2PRE2 83 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 CYB5R3P00387 301 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 C16orf82Q7Z2V1 217 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 DCTN5Q9BTE1 182 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SAA2-SAA4A0A096LPE2 208 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 C1QTNF9BB2RNN3 333 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SAA2P0DJI9 122 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SLC25A16P16260 332 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM11P17152 192 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 C2orf83Q53S99 150 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 C19orf35Q6ZS72 473 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 OR10G8Q8NGN5 311 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 METTL26Q96S19 204 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 NPCDR1Q9BY65 106 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF586Q9NXT0 402 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ISLRO14498 428 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 NTF4P34130 210 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SRP14P37108 136 aaKnown RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 KLHDC1Q8N7A1 406 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM167AQ8TBQ9 72 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 METTL1Q9UBP6 276 aaKnown RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SOX21Q9Y651 276 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 A0A0A6YYD4 124 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1W2PPQ1 181 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 THBDP07204 575 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 KLK2P20151 261 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TAS2R60P59551 318 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 ARF6P62330 175 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 PSG5Q15238 335 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM249Q2WGJ8 235 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 WDR25Q64LD2 544 aaPredicted RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 LAMTOR1Q6IAA8 161 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 LYPD1Q8N2G4 141 aa2.81□□□□□ -1.96
VPS13C-203ENST00000395896 SRSF12Q8WXF0 261 aaKnown RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 CARHSP1Q9Y2V2 147 aaKnown RBP2.81□□□□□ -1.96
VPS13C-203ENST00000395896 DPRXA6NFQ7 191 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 FOXI3A8MTJ6 420 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 C2orf68Q2NKX9 166 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 SPSB3Q6PJ21 355 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 KIR3DL3Q8N743 410 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 OR4X1Q8NH49 305 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 IMMP2LQ96T52 175 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 SH3BGRL3Q9H299 93 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 SLC25A22Q9H936 323 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 WDR83OSQ9Y284 106 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 A0A1B0GW15 77 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 LINC01549A6NIU2 74 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 AP4M1O00189 453 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 ARG1P05089 322 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 FAM216BQ8N7L0 139 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 C5orf17Q8NAS9 161 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 GPR146Q96CH1 333 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 MISP3Q96FF7 219 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 NIPBLQ6KC79 2804 aaeCLIP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 FGF16O43320 207 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 Q56UQ5 140 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 PVRIGQ6DKI7 326 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 LINC00574Q9H8X3 128 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 KMT2BQ9UMN6 2715 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 ORM1P02763 201 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF90Q03938 601 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 RCC1LQ96I51 464 aaKnown RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 RBKSQ9H477 322 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 TRAV20A0A0B4J274 112 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 C7orf77A4D0Y5 90 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 HSBP1O75506 76 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 F12P00748 615 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 FOXG1P55316 489 aaPredicted RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 RPL11P62913 178 aaKnown RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 PSG9Q00887 426 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 ZNF562Q6V9R5 426 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 G3V3Q6 166 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 NDUFB8O95169 186 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 TMEM14BQ9NUH8 114 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 IGKV1D-17A0A075B6S4 117 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 COL8A1P27658 744 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 RPS20P60866 119 aaKnown RBP2.8□□□□□ -1.96
VPS13C-203ENST00000395896 CD69Q07108 199 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 CLDND2Q8NHS1 167 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 FAM210BQ96KR6 192 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 RSG1Q9BU20 258 aa2.8□□□□□ -1.96
VPS13C-203ENST00000395896 OR51M1Q9H341 326 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms