RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PPP1R27Q86WC6 154 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 MMD2Q8IY49 270 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 TMEM252Q8N6L7 170 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 OR8H1Q8NGG4 311 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 DTD1Q8TEA8 209 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 METTL1Q9UBP6 276 aaKnown RBP9.06□□□□□ -0.96
RTN1-203ENST00000395090 NUP50Q9UKX7 468 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 FLNAP21333 2647 aaKnown RBP9.06□□□□□ -0.96
RTN1-203ENST00000395090 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
RTN1-203ENST00000395090 CELSR1Q9NYQ6 3014 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 CEBPZOSA8MTT3 80 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 GCSHP23434 173 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 AP2S1P53680 142 aaPredicted RBP9.05□□□□□ -0.96
RTN1-203ENST00000395090 PRCDQ00LT1 54 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 KRTAP1-1Q07627 177 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 PJVKQ0ZLH3 352 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 HES1Q14469 280 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 OPCMLQ14982 345 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 COMMD5Q9GZQ3 224 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 SLC25A31Q9H0C2 315 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 ARL6Q9H0F7 186 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 PSENENQ9NZ42 101 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 FAM96BQ9Y3D0 163 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 SOX21Q9Y651 276 aaPredicted RBP9.05□□□□□ -0.96
RTN1-203ENST00000395090 SVEP1Q4LDE5 3571 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 IGSF23A1L1A6 192 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 FCN1O00602 326 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 FBP1P09467 338 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 MYOD1P15172 320 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 TMEM11P17152 192 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 CAV2P51636 162 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 MMDQ15546 238 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 C5orf64Q2M2E5 130 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 TEX261Q6UWH6 196 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 TMEM14EPQ6UXP3 125 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 OR1L8Q8NGR8 309 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 KRTAP4-8Q9BYQ9 185 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 U3KQ87 197 aa9.05□□□□□ -0.96
RTN1-203ENST00000395090 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
RTN1-203ENST00000395090 CGB1A6NKQ9 187 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 E7EUB6 86 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 TAAR5O14804 337 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 CD5LO43866 347 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 IAPPP10997 89 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
RTN1-203ENST00000395090 SSBP2P81877 361 aaPredicted RBP9.04□□□□□ -0.96
RTN1-203ENST00000395090 EWSR1Q01844 656 aaKnown RBP eCLIP9.04□□□□□ -0.96
RTN1-203ENST00000395090 BAXQ07812 192 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 TEX29Q8N6K0 151 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 NEU1Q99519 415 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 ARPC5LQ9BPX5 153 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 HIPK2Q9H2X6 1198 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 CYTL1Q9NRR1 136 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 C1RLQ9NZP8 487 aa9.04□□□□□ -0.96
RTN1-203ENST00000395090 FLNBO75369 2602 aaKnown RBP9.04□□□□□ -0.96
RTN1-203ENST00000395090 A0A1B0GW64 132 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 KRTAP23-1A1A580 65 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 LINC00862A6NCI5 91 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 PMS2P5A8MQ11 134 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 DIRC3C9JPN6 131 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 BCL2L11O43521 198 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 SULT1A1P50225 295 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 ATP5IP56385 69 aaPredicted RBP9.03□□□□□ -0.96
RTN1-203ENST00000395090 LRRC75BQ2VPJ9 315 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 BSXQ3C1V8 233 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 SPINK9Q5DT21 86 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 SPANXN5Q5MJ07 72 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 STPG2Q8N412 459 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 ZNF680Q8NEM1 530 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 BSCL2Q96G97 398 aaPredicted RBP9.03□□□□□ -0.96
RTN1-203ENST00000395090 SSX3Q99909 188 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 PRDM13Q9H4Q3 707 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 HEYLQ9NQ87 328 aaPredicted RBP9.03□□□□□ -0.96
RTN1-203ENST00000395090 KIAA1456Q9P272 454 aa9.03□□□□□ -0.96
RTN1-203ENST00000395090 STRAPQ9Y3F4 350 aaKnown RBP9.03□□□□□ -0.96
RTN1-203ENST00000395090 PLXNB1O43157 2135 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 RPS10-NUDT3A0A1W2PQS6 291 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 KANTRA0A1W2PQU2 76 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 H3BP45 60 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 ACTL6BO94805 426 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 OPN1MWP04001 364 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 RPP30P78346 268 aaKnown RBP9.02□□□□□ -0.96
RTN1-203ENST00000395090 ZNF562Q6V9R5 426 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 SLC51BQ86UW2 128 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 KRTAP19-1Q8IUB9 90 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 Q8N9W7 124 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 OR10W1Q8NGF6 305 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 RBM14Q96PK6 669 aaKnown RBP9.02□□□□□ -0.96
RTN1-203ENST00000395090 OR4C12Q96R67 309 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 CLCC1Q96S66 551 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 PLEKHA3Q9HB20 300 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.96
RTN1-203ENST00000395090 ACANP16112 2415 aa9.02□□□□□ -0.97
RTN1-203ENST00000395090 A0A1W2PN81 502 aa9.02□□□□□ -0.97
RTN1-203ENST00000395090 NCBP2LA6PVI3 153 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms