RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TIGITQ495A1 244 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 VHLLQ6RSH7 139 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 ACP7Q6ZNF0 438 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 NANOS1Q8WY41 292 aaKnown RBP11.8□□□□□ -0.52
CLIP2-203ENST00000395060 GP6Q9HCN6 339 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 SLC35D1Q9NTN3 355 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 USF1P22415 310 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-203ENST00000395060 NPY1RP25929 384 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 SLC35E4Q6ICL7 350 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 WDR82Q6UXN9 313 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 C11orf53Q8IXP5 236 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 DEFB108BQ8NET1 73 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 PCSK5Q92824 1860 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 CLEC7AQ9BXN2 247 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 CDC42EP3Q9UKI2 254 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 KALRNO60229 2985 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
CLIP2-203ENST00000395060 CD46P15529 392 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 RPL8P62917 257 aaKnown RBP11.79□□□□□ -0.52
CLIP2-203ENST00000395060 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
CLIP2-203ENST00000395060 TMEM136Q6ZRR5 245 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 OR2Z1Q8NG97 314 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 RAB1CQ92928 201 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 KCNS1Q96KK3 526 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 UQCR10Q9UDW1 63 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 PLCE1Q9P212 2302 aa11.79□□□□□ -0.52
CLIP2-203ENST00000395060 LINC00614P0C842 121 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 S100A7P31151 101 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 GAGE1Q13065 139 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 ZNF766Q5HY98 468 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 TSKUQ8WUA8 353 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 PKDREJQ9NTG1 2253 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 ACP1P24666 158 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 CEACAM8P31997 349 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-203ENST00000395060 VDAC2P45880 294 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-203ENST00000395060 MFAP2P55001 183 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 RNFT1Q5M7Z0 435 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 PEAR1Q5VY43 1037 aaPredicted RBP11.78□□□□□ -0.52
CLIP2-203ENST00000395060 MORN5Q5VZ52 161 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 NIT1Q86X76 327 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 KIR3DL3Q8N743 410 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 SLC24A4Q8NFF2 622 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 CSMD1Q96PZ7 3565 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
CLIP2-203ENST00000395060 GGTLC3B5MD39 225 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 HSBP1O75506 76 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 APCSP02743 223 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 CYC1P08574 325 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 RPP30P78346 268 aaKnown RBP11.77□□□□□ -0.52
CLIP2-203ENST00000395060 TNXAQ16473 311 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 SPRNQ5BIV9 151 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 OR9G1Q8NH87 305 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 NABP2Q9BQ15 211 aa11.77□□□□□ -0.52
CLIP2-203ENST00000395060 IGHV1-2P23083 117 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.53
CLIP2-203ENST00000395060 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.53
CLIP2-203ENST00000395060 LYG1Q8N1E2 194 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 RND1Q92730 232 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 PRDX2P32119 198 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 ASCL3Q9NQ33 180 aa11.77□□□□□ -0.53
CLIP2-203ENST00000395060 H3BTX0 84 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 M0R2Z0 102 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 MT-CO2P00403 227 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 TCTAP57738 103 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 Q0VG73 95 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 RAB31Q13636 194 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 MORN2Q502X0 79 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 ZNF331Q9NQX6 463 aaPredicted RBP11.76□□□□□ -0.53
CLIP2-203ENST00000395060 SLC45A2Q9UMX9 530 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 TACC2O95359 2948 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 IGKV1OR2-108A0A075B7D4 117 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 PYYP10082 97 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 CTRLP40313 264 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 CX3CL1P78423 397 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 STUMQ69YW2 141 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 SPRR3Q9UBC9 169 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 TANC2Q9HCD6 1990 aa11.76□□□□□ -0.53
CLIP2-203ENST00000395060 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 PMCHL2Q9BQD1 86 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 DYSFO75923 2080 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TRGV10A0A0A0MS01 117 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 CORTO00230 105 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 MPDU1O75352 247 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TSPOP30536 169 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 OR52E5Q8NH55 327 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 IL19Q9UHD0 177 aa11.75□□□□□ -0.53
CLIP2-203ENST00000395060 TNRC6BQ9UPQ9 1833 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms