RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 SMIM4Q8WVI0 70 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 CXorf58Q96LI9 332 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 FYTTD1Q96QD9 318 aaKnown RBP14.61□□□□□ -0.07
UPK3B-203ENST00000394849 SLC2A9Q9NRM0 540 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 UFC1Q9Y3C8 167 aa14.61□□□□□ -0.07
UPK3B-203ENST00000394849 RYR1P21817 5038 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 CTDSPLO15194 276 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 RBFOX2O43251 390 aaKnown RBP eCLIP14.6□□□□□ -0.07
UPK3B-203ENST00000394849 RAB3DO95716 219 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 IFNA4P05014 189 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 CRYGCP07315 174 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 BRWD1-AS2P59051 145 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 PHLDA2Q53GA4 152 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 SSX9Q7RTT3 188 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 ARRDC1Q8N5I2 433 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 CD300LFQ8TDQ1 290 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 AIFM2Q9BRQ8 373 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 SELENOKQ9Y6D0 94 aa14.6□□□□□ -0.07
UPK3B-203ENST00000394849 HMX3A6NHT5 357 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 TEX22C9J3V5 150 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 PGLYRP1O75594 196 aaPredicted RBP14.59□□□□□ -0.07
UPK3B-203ENST00000394849 HPRT1P00492 218 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 PGAM2P15259 253 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 RPL27AP46776 148 aaKnown RBP14.59□□□□□ -0.07
UPK3B-203ENST00000394849 ZNF585BQ52M93 769 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 LAMTOR1Q6IAA8 161 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 STEAP1BQ6NZ63 245 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 FANCD2OSQ96PS1 177 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 OR2A7Q96R45 310 aa14.59□□□□□ -0.07
UPK3B-203ENST00000394849 TSPAN4O14817 238 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 KBTBD11O94819 623 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 IGHV3-23P01764 117 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 CLEC3BP05452 202 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 ZNF735P0CB33 412 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 UCP3P55916 312 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 SCGB2B2Q4G0G5 96 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 GALNT14Q96FL9 552 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 NDUFA13Q9P0J0 144 aa14.58□□□□□ -0.08
UPK3B-203ENST00000394849 CD74P04233 296 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 IL6RP08887 468 aaPredicted RBP14.57□□□□□ -0.08
UPK3B-203ENST00000394849 DEFA4P12838 97 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 NQO2P16083 231 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 F2RP25116 425 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 TAS2R31P59538 309 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 MEF2DQ14814 521 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 PUSL1Q8N0Z8 303 aaKnown RBP14.57□□□□□ -0.08
UPK3B-203ENST00000394849 OR4D10Q8NGI6 311 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 DGCR14Q96DF8 476 aaKnown RBP14.57□□□□□ -0.08
UPK3B-203ENST00000394849 PLEKHA2Q9HB19 425 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 HRASLSQ9HDD0 168 aa14.57□□□□□ -0.08
UPK3B-203ENST00000394849 GSTZ1O43708 216 aaPredicted RBP14.56□□□□□ -0.08
UPK3B-203ENST00000394849 S1PR2O95136 353 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 AKAIN1P0CW23 69 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 CTRB1P17538 263 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 PPP5CP53041 499 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 ERVK-16P61578 105 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 RBMS2Q15434 407 aaKnown RBP14.56□□□□□ -0.08
UPK3B-203ENST00000394849 CTRB2Q6GPI1 263 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 UNQ9165/PRO28630Q6UXU0 137 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 LINC00336Q6ZUF6 198 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 DMBX1Q8NFW5 382 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 C11orf45Q8TAV5 145 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 TMEM167AQ8TBQ9 72 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 C2CD4CQ8TF44 421 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 MAP6D1Q9H9H5 199 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 COMMD9Q9P000 198 aa14.56□□□□□ -0.08
UPK3B-203ENST00000394849 OR4C46A6NHA9 309 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 DISC1C4P0D8 188 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 LPAR6P43657 344 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 PYDC2Q56P42 97 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 FAAP20Q6NZ36 180 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 PLET1Q6UQ28 207 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 TBC1D26Q86UD7 250 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 LHFPL1Q86WI0 220 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 OR4A5Q8NH83 315 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 SOSTQ9BQB4 213 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 BET1LQ9NYM9 111 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 THYN1Q9P016 225 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 UBQLN2Q9UHD9 624 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 S4R3C0 116 aa14.55□□□□□ -0.08
UPK3B-203ENST00000394849 IGLV11-55A0A075B6I3 123 aa14.54□□□□□ -0.08
UPK3B-203ENST00000394849 RPA2P15927 270 aa14.54□□□□□ -0.08
UPK3B-203ENST00000394849 RPL8P62917 257 aaKnown RBP14.54□□□□□ -0.08
UPK3B-203ENST00000394849 TERB2Q8NHR7 220 aa14.54□□□□□ -0.08
UPK3B-203ENST00000394849 ZFAND1Q8TCF1 268 aa14.54□□□□□ -0.08
UPK3B-203ENST00000394849 ZNF486Q96H40 463 aaPredicted RBP14.54□□□□□ -0.08
UPK3B-203ENST00000394849 ZNF436Q9C0F3 470 aaPredicted RBP14.54□□□□□ -0.08
UPK3B-203ENST00000394849 C11orf68Q9H3H3 251 aaKnown RBP14.54□□□□□ -0.08
UPK3B-203ENST00000394849 MED14OSP0DP75 135 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 AREGP15514 252 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 RPL35AP18077 110 aaKnown RBP14.53□□□□□ -0.08
UPK3B-203ENST00000394849 PI3P19957 117 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 CMC4P56277 68 aaPredicted RBP14.53□□□□□ -0.08
UPK3B-203ENST00000394849 POU2AF1Q16633 256 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 ODF3L2Q3SX64 289 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 C19orf35Q6ZS72 473 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 OR4C16Q8NGL9 310 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 RARRES2Q99969 163 aa14.53□□□□□ -0.08
UPK3B-203ENST00000394849 DAZ1Q9NQZ3 744 aaKnown RBP14.53□□□□□ -0.08
UPK3B-203ENST00000394849 TMEM140Q9NV12 185 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms