RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 FAM89BQ8N5H3 189 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 MPDZO75970 2070 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 SLC17A3O00476 420 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 TMEM252Q8N6L7 170 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 RPP25Q9BUL9 199 aaKnown RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 E9PQ18 207 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 ERGP11308 486 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 BMPERQ8N8U9 685 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 AQP3Q92482 292 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 MRPL20Q9BYC9 149 aaKnown RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 MRPS18AQ9NVS2 196 aaKnown RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 MRPS18CQ9Y3D5 142 aaKnown RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 F11RQ9Y624 299 aaKnown RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 GREB1Q4ZG55 1949 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 FAM90A9PA6NNJ1 464 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 COX6A1P12074 109 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 NR2C2APQ86WQ0 139 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 GPR146Q96CH1 333 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 SMPXQ9UHP9 88 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 KLK13Q9UKR3 277 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 PCNX1Q96RV3 2341 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 IGKV3-20P01619 116 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 DPRXA6NFQ7 191 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 FABP5P3A8MUU1 101 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 HOXB3P14651 431 aaPredicted RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 CD33P20138 364 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 PGFP49763 221 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 ICAM4Q14773 271 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 ACP7Q6ZNF0 438 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 RPP21Q9H633 154 aaKnown RBP6.32□□□□□ -1.4
SYNE2-205ENST00000394768 SPCS1Q9Y6A9 102 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 R3HDMLQ9H3Y0 253 aa6.32□□□□□ -1.4
SYNE2-205ENST00000394768 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.31□□□□□ -1.4
SYNE2-205ENST00000394768 COLCA1Q6ZS62 124 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 ABHD17AQ96GS6 310 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 GDF15Q99988 308 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TRAF4Q9BUZ4 470 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-205ENST00000394768 C15orf61A6NNL5 157 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 WNT2P09544 360 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TNFRSF6BO95407 300 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 KLK2P20151 261 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 CRYBB3P26998 211 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 OTORQ9NRC9 128 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 KLF12Q9Y4X4 402 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 ANK1P16157 1881 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TRAV14DV4A0A0A6YYC5 116 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 A0A1B0GWB2 263 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 REG1AP05451 166 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 SCTP09683 121 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 FHITP49789 147 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 Q96M66 194 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 FOXA2Q9Y261 457 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 GBF1Q92538 1859 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 PGPEP1LA6NFU8 196 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 MGAT2Q10469 447 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 C9orf62Q8N4C0 152 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 SCN10AQ9Y5Y9 1956 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 OOSP1A8MZH6 123 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 FOXS1O43638 330 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 ZNF257Q9Y2Q1 563 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TRAV9-2A0A087WT02 112 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TMEM8BA6NDV4 472 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 TOMM40O96008 361 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 C1orf100Q5SVJ3 147 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 IFI27L2Q9H2X8 130 aa6.31□□□□□ -1.4
SYNE2-205ENST00000394768 COLQQ9Y215 455 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-205ENST00000394768 RIF1Q5UIP0 2472 aaKnown RBP6.3□□□□□ -1.4
SYNE2-205ENST00000394768 PATE3B3GLJ2 98 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 GCHFRP30047 84 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 SSBP4Q9BWG4 385 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-205ENST00000394768 AURKAIP1Q9NWT8 199 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-205ENST00000394768 COL18A1P39060 1754 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 ZP1P60852 638 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 INSL4Q14641 139 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 GLIPR1P48060 266 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 SPSB3Q6PJ21 355 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 OR4D11Q8NGI4 311 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 TNFSF13O75888 250 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 DANCRP0C864 163 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 C1QL3Q5VWW1 255 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 TPRX1Q8N7U7 411 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 VWC2LB2RUY7 222 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 H3BMM0 161 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 M0R2P5 195 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 CD28P10747 220 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 A0A1W2PQF6 199 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 GCM2O75603 506 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-205ENST00000394768 SPNP16150 400 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 ZNF415Q09FC8 603 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 LIMS2Q7Z4I7 341 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 E9PLN8 166 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 INSP01308 110 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 GATA3P23771 443 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 TEX38Q6PEX7 206 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 C19orf48Q6RUI8 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms