RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 APOBEC4Q8WW27 367 aaKnown RBP11.5□□□□□ -0.57
USP49-203ENST00000394253 TRPM3Q9HCF6 1732 aaPredicted RBP11.5□□□□□ -0.57
USP49-203ENST00000394253 SNRPCP09234 159 aaKnown RBP11.5□□□□□ -0.57
USP49-203ENST00000394253 TMEM171Q8WVE6 324 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 MESP2Q0VG99 397 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 ZNF79Q15937 498 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 ANAPC1Q9H1A4 1944 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 PF4P02776 101 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 F2Z2F3 143 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 ASB1Q9Y576 335 aa11.5□□□□□ -0.57
USP49-203ENST00000394253 VSIG10L2P0DP72 767 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 TSPAN7P41732 249 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 UBE2V1Q13404 147 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 RTN4RL2Q86UN3 420 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 A0A1W2PQD3 144 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 CYP2G1PQ6ZSU1 146 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 MYO18BQ8IUG5 2567 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 ZNF205O95201 554 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 NBEAP1P0C6P0 100 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 NTN1O95631 604 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 DEFB103AP81534 67 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 MPV17P39210 176 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 CD69Q07108 199 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 FDCSPQ8NFU4 85 aa11.49□□□□□ -0.57
USP49-203ENST00000394253 KLF4O43474 513 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 CCL7P80098 99 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 UNC119Q13432 240 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 IGKV3D-20A0A0C4DH25 116 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 CD28P10747 220 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 EGR2P11161 476 aaPredicted RBP11.48□□□□□ -0.57
USP49-203ENST00000394253 LINC00158P58513 81 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 RCC1LQ96I51 464 aaKnown RBP11.48□□□□□ -0.57
USP49-203ENST00000394253 NCR2O95944 276 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 EGR1P18146 543 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 ICAM4Q14773 271 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 AQP3Q92482 292 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 JMJD8Q96S16 334 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
USP49-203ENST00000394253 FBXW9Q5XUX1 488 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 PAX4O43316 350 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 UBE2WQ96B02 151 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 ANAPC10Q9UM13 185 aa11.48□□□□□ -0.57
USP49-203ENST00000394253 PCSK4Q6UW60 755 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 TMEM170AQ8WVE7 144 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 IFITM2Q01629 132 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 TCTEX1D4Q5JR98 221 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 PLA2G3Q9NZ20 509 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 TMEM229AB2RXF0 380 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 R4GN57 208 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 GPBAR1Q8TDU6 330 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 NEUROG3Q9Y4Z2 214 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 NYNRINQ9P2P1 1898 aaKnown RBP11.47□□□□□ -0.57
USP49-203ENST00000394253 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
USP49-203ENST00000394253 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
USP49-203ENST00000394253 KCPQ6ZWJ8 1503 aa11.47□□□□□ -0.57
USP49-203ENST00000394253 SELLP14151 372 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 P2RY6Q15077 328 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 LRRC61Q9BV99 259 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 UBL5Q9BZL1 73 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 LHX2P50458 406 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 PLXNA3P51805 1871 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 SRFP11831 508 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 SPINK14Q6IE38 97 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 GTF3AQ92664 365 aaKnown RBP11.46□□□□□ -0.57
USP49-203ENST00000394253 SAXO1Q8IYX7 474 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 WNT2BQ93097 391 aa11.46□□□□□ -0.57
USP49-203ENST00000394253 IGHV1-69-2A0A0G2JMI3 117 aa11.46□□□□□ -0.58
USP49-203ENST00000394253 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.58
USP49-203ENST00000394253 C5orf66Q9H5L9 145 aa11.46□□□□□ -0.58
USP49-203ENST00000394253 OR9G9P0C7N8 305 aa11.46□□□□□ -0.58
USP49-203ENST00000394253 ATG4DQ86TL0 474 aaPredicted RBP11.46□□□□□ -0.58
USP49-203ENST00000394253 TNFSF13O75888 250 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 MRPS18BQ9Y676 258 aaKnown RBP11.45□□□□□ -0.58
USP49-203ENST00000394253 PGLYRP1O75594 196 aaPredicted RBP11.45□□□□□ -0.58
USP49-203ENST00000394253 C1QTNF9P0C862 333 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 CRYGNQ8WXF5 182 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 CALYQ9NYX4 217 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 MYOD1P15172 320 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 REG1AP05451 166 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 FAM90A2PQ658T7 463 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 TMEM186Q96B77 213 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 A8MXK9 166 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 PMS2CLQ68D20 193 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 MAFAQ8NHW3 353 aaPredicted RBP11.45□□□□□ -0.58
USP49-203ENST00000394253 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 SOCS3O14543 225 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 DLEU1O43261 78 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 INSP01308 110 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 CACNG8Q8WXS5 425 aa11.45□□□□□ -0.58
USP49-203ENST00000394253 LOC105371267A0A1B0GV96 52 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 UCP2P55851 309 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HAPLN4Q86UW8 402 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms