RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
GAPVD1-205ENST00000394084 HELTA6NFD8 242 aa11.4□□□□□ -0.59
GAPVD1-205ENST00000394084 ASPHD1Q5U4P2 390 aa11.4□□□□□ -0.59
GAPVD1-205ENST00000394084 C1orf174Q8IYL3 243 aa11.4□□□□□ -0.59
GAPVD1-205ENST00000394084 OR9G1Q8NH87 305 aa11.4□□□□□ -0.59
GAPVD1-205ENST00000394084 C11orf52Q96A22 123 aa11.4□□□□□ -0.59
GAPVD1-205ENST00000394084 GAFA1Q96PS6 74 aa11.4□□□□□ -0.59
GAPVD1-205ENST00000394084 FTH1P19P0C7X4 201 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 CT45A6P0DMU7 189 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 CT45A5P0DMU8 189 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 CT45A7P0DMV0 189 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 LGALS4P56470 323 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 C22orf34Q6ZV56 151 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 Q6ZWC4 215 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 ZNF439Q8NDP4 499 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 PRNDQ9UKY0 176 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 LAMA5O15230 3695 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 TDRG1Q3Y452 100 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 SNHG12Q9BXW3 62 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 V9GYV3 84 aa11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 RAI1Q7Z5J4 1906 aaPredicted RBP11.39□□□□□ -0.59
GAPVD1-205ENST00000394084 TEX50A0A1B0GTY4 177 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 MBD3L4A6NDZ8 208 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 MBD3L3A6NE82 208 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 MBD3L5A6NJ08 208 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 C9JCJ5 164 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 UPK2O00526 184 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 KIAA1644Q3SXP7 199 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 TIMM23BQ5SRD1 257 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 ST6GALNAC3Q8NDV1 305 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 MBD3L2Q8NHZ7 208 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 TANC2Q9HCD6 1990 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 TPPP2P59282 170 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 SUMO1P63165 101 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 C1orf194Q5T5A4 169 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 STUMQ69YW2 141 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 ADTRPQ96IZ2 230 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 ITGB1BP1O14713 200 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 MGST1P10620 155 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 CDKN1AP38936 164 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 REG1BP48304 166 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 SELENOTP62341 195 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 LBHQ53QV2 105 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 FAM169BQ8N8A8 192 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 NHLRC2Q8NBF2 726 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 CORO2AQ92828 525 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 TMEM106BQ9NUM4 274 aa11.38□□□□□ -0.59
GAPVD1-205ENST00000394084 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 FAM27E3Q08E93 113 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 FAM103A1Q9BTL3 118 aaKnown RBP11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 SAMD10Q9BYL1 202 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 RAB9BQ9NP90 201 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 TECRQ9NZ01 308 aaKnown RBP11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 IL19Q9UHD0 177 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 FAM215AQ9Y5M1 114 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 TRAV5A0A0B4J249 113 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 GGTLC3B5MD39 225 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 AREGP15514 252 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 ZNF705AQ6ZN79 300 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 ZCCHC24Q8N2G6 241 aaKnown RBP11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 CHODLQ9H9P2 273 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 SERTAD4Q9NUC0 356 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 TTC28Q96AY4 2481 aa11.37□□□□□ -0.59
GAPVD1-205ENST00000394084 IGLV3-9A0A075B6K5 115 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 TCAPO15273 167 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 CCL8P80075 99 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 OR2T6Q8NHC8 308 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 SLC25A10Q9UBX3 287 aaPredicted RBP11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 NAT8BQ9UHF3 227 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 TIGITQ495A1 244 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 MORN5Q5VZ52 161 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 CHRNB4P30926 498 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 SELENOVP59797 346 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 NUTF2P61970 127 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 POU2AF1Q16633 256 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 MRPL54Q6P161 138 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 ZADH2Q8N4Q0 377 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 MRPL20Q9BYC9 149 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-205ENST00000394084 KIR2DL5BA0A0G2JN68 375 aa11.35□□□□□ -0.59
GAPVD1-205ENST00000394084 KIR2DL5BA0A0G2JPC4 375 aa11.35□□□□□ -0.59
GAPVD1-205ENST00000394084 CA1P00915 261 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-205ENST00000394084 RNASE2P10153 161 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-205ENST00000394084 ZNF788Q6ZQV5 615 aa11.35□□□□□ -0.59
GAPVD1-205ENST00000394084 SLC25A48Q6ZT89 311 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-205ENST00000394084 KIR2DL5AQ8N109 375 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms