RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TFPI2P48307 235 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 Q56UQ5 140 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 AADACL3Q5VUY0 350 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 TMEM17Q86X19 198 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 Q8NAQ8 132 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 TMEM116Q8NCL8 245 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 SLC25A38Q96DW6 304 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 DAPK2Q9UIK4 370 aa11.21□□□□□ -0.61
CHMP3-202ENST00000393773 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
CHMP3-202ENST00000393773 FGF9P31371 208 aaPredicted RBP11.2□□□□□ -0.62
CHMP3-202ENST00000393773 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
CHMP3-202ENST00000393773 TXNL4BQ9NX01 149 aaKnown RBP11.2□□□□□ -0.62
CHMP3-202ENST00000393773 IGKV3-7A0A075B6H7 116 aa11.19□□□□□ -0.62
CHMP3-202ENST00000393773 CMC4P56277 68 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-202ENST00000393773 ERVK-16P61578 105 aa11.19□□□□□ -0.62
CHMP3-202ENST00000393773 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
CHMP3-202ENST00000393773 HINT2Q9BX68 163 aa11.19□□□□□ -0.62
CHMP3-202ENST00000393773 HRH4Q9H3N8 390 aa11.19□□□□□ -0.62
CHMP3-202ENST00000393773 NSG2Q9Y328 171 aa11.19□□□□□ -0.62
CHMP3-202ENST00000393773 OR51B2Q9Y5P1 312 aa11.19□□□□□ -0.62
CHMP3-202ENST00000393773 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 DBX1A6NMT0 343 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 C15orf61A6NNL5 157 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 IGLL5B9A064 214 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 C11orf94C9JXX5 98 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 NUPL2O15504 423 aaKnown RBP11.18□□□□□ -0.62
CHMP3-202ENST00000393773 MRPS14O60783 128 aaKnown RBP11.18□□□□□ -0.62
CHMP3-202ENST00000393773 RLN1P04808 185 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 GNRHRP30968 328 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 TMEM187Q14656 261 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 TPRA1Q86W33 373 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 CADM3Q8N126 398 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 GBGT1Q8N5D6 347 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 OR5H6Q8NGV6 325 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 GIMAP1Q8WWP7 306 aa11.18□□□□□ -0.62
CHMP3-202ENST00000393773 RRP15Q9Y3B9 282 aaKnown RBP11.18□□□□□ -0.62
CHMP3-202ENST00000393773 TRAV18A0A075B6X5 111 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 I3L2K1 104 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 FCER2P06734 321 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 F2RP25116 425 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 FAM24BQ8N5W8 94 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 OR5AP2Q8NGF4 316 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 FCAMRQ8WWV6 532 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 DGCR14Q96DF8 476 aaKnown RBP11.17□□□□□ -0.62
CHMP3-202ENST00000393773 NXF2Q9GZY0 626 aaKnown RBP11.17□□□□□ -0.62
CHMP3-202ENST00000393773 BLOC1S6Q9UL45 172 aa11.17□□□□□ -0.62
CHMP3-202ENST00000393773 TRAV14DV4A0A0A6YYC5 116 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
CHMP3-202ENST00000393773 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
CHMP3-202ENST00000393773 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 G6PCP35575 357 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 SCAND1P57086 179 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 RBMY1FQ15415 496 aaKnown RBP11.16□□□□□ -0.62
CHMP3-202ENST00000393773 UBE2UQ5VVX9 321 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 LEMD1Q68G75 181 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 TCF24Q7RTU0 167 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 VSIRQ9H7M9 311 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 AUNIPQ9H7T9 357 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 TMEM14BQ9NUH8 114 aa11.16□□□□□ -0.62
CHMP3-202ENST00000393773 HSPG2P98160 4391 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 A0A0A6YYH2 397 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 A6NJ64 397 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 YIF1AO95070 293 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 KRASP01116 189 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 LPAR6P43657 344 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 DEFB131AP59861 70 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 HERV-K104P61576 105 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 Q6ZTC4 211 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 LILRB2Q8N423 598 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 ZNF114Q8NC26 417 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 MOB3AQ96BX8 217 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 TMEM56Q96MV1 263 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 CMTM3Q96MX0 182 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 FXYD6Q9H0Q3 95 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
CHMP3-202ENST00000393773 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 TRAV2A0A0B4J234 112 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 MEIS3P1A6NDR6 274 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 XRCC3O43542 346 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 PGLYRP1O75594 196 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-202ENST00000393773 SNAPC5O75971 98 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 DFFBO76075 338 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 APOHP02749 345 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-202ENST00000393773 CLEC2LP0C7M8 214 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 MED14OSP0DP75 135 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 C4BPBP20851 252 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 SDC2P34741 201 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 MFAP4P55083 255 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 GABARAPL2P60520 117 aa11.14□□□□□ -0.63
CHMP3-202ENST00000393773 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms