RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 NDUFA13Q9P0J0 144 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 BIRC6Q9NR09 4857 aa13.58□□□□□ -0.24
PDLIM7-205ENST00000393551 C15orf61A6NNL5 157 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 CTSGP08311 255 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 ANKRD55Q3KP44 614 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 RBPMS2Q6ZRY4 209 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 TBC1D26Q86UD7 250 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 SNX29P2Q8IUI4 249 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 CMTM3Q96MX0 182 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
PDLIM7-205ENST00000393551 LOC102724200A0A096LPH7 203 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 NDUFA4O00483 81 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 TSPAN4O14817 238 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 HPGDSO60760 199 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 SNAPC5O75971 98 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 TSPAN5P62079 268 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 SPSB3Q6PJ21 355 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 OR2C3Q8N628 320 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 OR5B3Q8NH48 314 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 ATP6V0BQ99437 205 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 SCPEP1Q9HB40 452 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 FAM212BQ9NTI7 297 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 UBQLN2Q9UHD9 624 aa13.56□□□□□ -0.24
PDLIM7-205ENST00000393551 CYB5BO43169 146 aa13.55□□□□□ -0.24
PDLIM7-205ENST00000393551 ZNF207O43670 478 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-205ENST00000393551 UCP3P55916 312 aa13.55□□□□□ -0.24
PDLIM7-205ENST00000393551 ODF3L2Q3SX64 289 aa13.55□□□□□ -0.24
PDLIM7-205ENST00000393551 UBAC2Q8NBM4 344 aa13.55□□□□□ -0.24
PDLIM7-205ENST00000393551 I3L2K1 104 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 K7EMT4 169 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 M0QYG6 137 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 RCVRNP35243 200 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 ALDH3B2P48448 385 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 OR1P1Q8NH06 330 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 IL17DQ8TAD2 202 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 C20orf24Q9BUV8 137 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 NAA50Q9GZZ1 169 aaKnown RBP13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 FKBP11Q9NYL4 201 aa13.54□□□□□ -0.24
PDLIM7-205ENST00000393551 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 IZUMO4Q1ZYL8 232 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 Q56UQ5 140 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 LPCAT3Q6P1A2 487 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 SLC38A6Q8IZM9 456 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 MRGPRFQ96AM1 343 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 KLK11Q9UBX7 282 aa13.53□□□□□ -0.24
PDLIM7-205ENST00000393551 C15orf62A8K5M9 175 aa13.52□□□□□ -0.25
PDLIM7-205ENST00000393551 IGHV3-48P01763 117 aa13.52□□□□□ -0.25
PDLIM7-205ENST00000393551 PRCDQ00LT1 54 aa13.52□□□□□ -0.25
PDLIM7-205ENST00000393551 CTF1Q16619 201 aa13.52□□□□□ -0.25
PDLIM7-205ENST00000393551 LHFPL1Q86WI0 220 aa13.52□□□□□ -0.25
PDLIM7-205ENST00000393551 ZNF114Q8NC26 417 aa13.52□□□□□ -0.25
PDLIM7-205ENST00000393551 A6NHS1 94 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 PI3P19957 117 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 FCGR2BP31994 310 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 RORCP51449 518 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 RNASE12Q5GAN4 147 aaKnown RBP13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 H2BFWTQ7Z2G1 175 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 OR4A16Q8NH70 328 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 MISP3Q96FF7 219 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 OR10C1Q96KK4 312 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 RNF2Q99496 336 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 SMPXQ9UHP9 88 aa13.51□□□□□ -0.25
PDLIM7-205ENST00000393551 KMT2AQ03164 3969 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 MT-CO2P00403 227 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 IGKV1-5P01602 117 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 CTSDP07339 412 aaPredicted RBP13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 P0C879 139 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 HSPE1P61604 102 aaKnown RBP13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 SPINK9Q5DT21 86 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 LAMTOR1Q6IAA8 161 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 WFDC3Q8IUB2 231 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 OR52I2Q8NH67 350 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 TP53RKQ96S44 253 aa13.5□□□□□ -0.25
PDLIM7-205ENST00000393551 FRAS1Q86XX4 4008 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 IGHV3-49A0A0A0MS15 119 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 IGHV7-4-1A0A0J9YVY3 117 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 CHEK1O14757 476 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 CD3DP04234 171 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 S100GP29377 79 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 RND3P61587 244 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 ZNF124Q15973 351 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 Q6ZWC4 215 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 OR4D10Q8NGI6 311 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 ABHD1Q96SE0 405 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 NXF2Q9GZY0 626 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-205ENST00000393551 A0A0B4J293 547 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 A0A0J9YWU9 116 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 SPRY2O43597 315 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 JTBO76095 146 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 GABARAPO95166 117 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 MFAP4P55083 255 aa13.48□□□□□ -0.25
PDLIM7-205ENST00000393551 FAM90A2PQ658T7 463 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms