RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 RPL39P5Q59GN2 51 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 DOLPP1Q86YN1 238 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 MRPL41Q8IXM3 137 aaKnown RBP7.97□□□□□ -1.13
COL6A3-204ENST00000392003 PCGF1Q9BSM1 259 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 NPCDR1Q9BY65 106 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 NAT8Q9UHE5 227 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 DOCK11Q5JSL3 2073 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 LOC400499M0QZD8 3231 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 COL6A6A6NMZ7 2263 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 PTPRBP23467 1997 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 A0A1W2PPV4 95 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 GCGP01275 180 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 CD1BP29016 333 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 ATP5J2P56134 94 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 ADIRFQ15847 76 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 TMEM241Q24JQ0 296 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 PDLIM3Q53GG5 364 aaPredicted RBP7.97□□□□□ -1.13
COL6A3-204ENST00000392003 TMEM183AQ8IXX5 376 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 OR1N2Q8NGR9 330 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 SFRP2Q96HF1 295 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 ADTRPQ96IZ2 230 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 SDF2L1Q9HCN8 221 aa7.97□□□□□ -1.13
COL6A3-204ENST00000392003 IGLV3-9A0A075B6K5 115 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 PMS2P5A8MQ11 134 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 TMPRSS3P57727 454 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 OR4F5Q8NH21 305 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 TMEM186Q96B77 213 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 OR4F4Q96R69 305 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 CTDSP1Q9GZU7 261 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 SS18L2Q9UHA2 77 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 SLC45A2Q9UMX9 530 aa7.96□□□□□ -1.13
COL6A3-204ENST00000392003 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 K7ENP7 123 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 TOMM40O96008 361 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 THBS3P49746 956 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 CR1LQ2VPA4 569 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 FAM201AQ5SY85 155 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 SNRNP40Q96DI7 357 aaKnown RBP7.96□□□□□ -1.14
COL6A3-204ENST00000392003 TBX15Q96SF7 602 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 SMPXQ9UHP9 88 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 RAXQ9Y2V3 346 aa7.96□□□□□ -1.14
COL6A3-204ENST00000392003 C15orf62A8K5M9 175 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 TMEM250H0YL14 139 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 MPDU1O75352 247 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 MMP23AO75900 390 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 IGKV1D-33P01593 117 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 IGKV1-33P01594 117 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 KIAA1644Q3SXP7 199 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.95□□□□□ -1.14
COL6A3-204ENST00000392003 OR52E5Q8NH55 327 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 MIEN1Q9BRT3 115 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 TMEM140Q9NV12 185 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 MSRB2Q9Y3D2 182 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 KBTBD11-OT1A0A1B0GTJ5 212 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 LHBP01229 141 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 CD40P25942 277 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 GATA4P43694 442 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 PRSS8Q16651 343 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 IQCJQ1A5X6 159 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 PRR27Q6MZM9 219 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 OR5B12Q96R08 314 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 IFI27L2Q9H2X8 130 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 KCNIP2Q9NS61 270 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 TMEM242Q9NWH2 141 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 WDR83OSQ9Y284 106 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 NCOR2Q9Y618 2525 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 A0A0U1RQK1 487 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 A0A1B0GV72 72 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 SIVA1O15304 175 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 CRYGCP07315 174 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 LOXL3P58215 753 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 VWC2Q2TAL6 325 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 SPRNQ5BIV9 151 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 VKORC1L1Q8N0U8 176 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 RND1Q92730 232 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 LEAP2Q969E1 77 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 COX11Q9Y6N1 276 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 BOD1L1Q8NFC6 3051 aa7.95□□□□□ -1.14
COL6A3-204ENST00000392003 PIEZO1Q92508 2521 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 KBTBD11O94819 623 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 HRASP01112 189 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 IGHV1-46P01743 117 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 TNFRSF1AP19438 455 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 UCNP55089 124 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 RAB31Q13636 194 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 PRR30Q53SZ7 412 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-204ENST00000392003 CYP2G1PQ6ZSU1 146 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 NEIL1Q96FI4 390 aaPredicted RBP7.94□□□□□ -1.14
COL6A3-204ENST00000392003 CCL13Q99616 98 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 GCM1Q9NP62 436 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 NGBQ9NPG2 151 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 TCF19Q9Y242 345 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 POLEQ07864 2286 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 FRYQ5TBA9 3013 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 A0A0G2JNJ9 132 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 PAGE4O60829 102 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 PROP1O75360 226 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 CNIH1O95406 144 aa7.94□□□□□ -1.14
COL6A3-204ENST00000392003 GATA3P23771 443 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms