RNA–Protein interactions for RNA: ENST00000390528.1

TRAJ9-201, Transcript of T cell receptor alpha joining 9, humanhuman

APPRIS P1 BASIC

Gene TRAJ9, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ9-201ENST00000390528 ATG2AQ2TAZ0 1938 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 TRAV8-2A0A0B4J237 113 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 GGT3PA6NGU5 568 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 XRCC2O43543 280 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 MPDU1O75352 247 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 NSA2O95478 260 aaKnown RBP-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 OR8G3PP0DMU2 310 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 MYL2P10916 166 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 TNNI1P19237 187 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 GADD45AP24522 165 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 CSKP41240 450 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 GCLMP48507 274 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 MRPL19P49406 292 aaKnown RBP-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 SULT1A2P50226 295 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 SEC61GP60059 68 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 KLKP1Q107X0 134 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 C2orf76Q3KRA6 126 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 MESTQ5EB52 335 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 LRRC6Q86X45 466 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 TMEM251Q8N6I4 163 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 ANKRD7Q92527 254 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 UCK2Q9BZX2 261 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 C6orf62Q9GZU0 229 aaPredicted RBP-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 NSRP1Q9H0G5 558 aaKnown RBP-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 FXYD6Q9H0Q3 95 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 ADA2Q9NZK5 511 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 LINC00527Q9UJ94 153 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 SBF1O95248 1867 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 NCOA1Q15788 1441 aa-3.1□□□□□ -2.91
TRAJ9-201ENST00000390528 AFDNP55196 1824 aaKnown RBP-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 GVQW2A0A096LPI5 108 aaPredicted RBP-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 FAM240BA0A1B0GVZ2 78 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 M0R1B8 84 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 HUS1O60921 280 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 HLA-DQB2P05538 268 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 ARF4P18085 180 aaPredicted RBP-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 SRMP19623 302 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 SPRR1BP22528 89 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 CPN2P22792 545 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 RPS3P23396 243 aaKnown RBP eCLIP-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 RPL30P62888 115 aaKnown RBP-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 FXYD3Q14802 87 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 EBPQ15125 230 aaKnown RBP-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 C5orf64Q2M2E5 130 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 SLC8B1Q6J4K2 584 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 CD200R1LQ6Q8B3 271 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 LINC00299Q6ZSB3 139 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 GAPTQ8N292 157 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 C5orf56Q8N8D9 126 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 OR4C5Q8NGB2 326 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 OR56B2PQ8NGI1 322 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 OR10AG1Q8NH19 301 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 CYTH2Q99418 400 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 ANP32EQ9BTT0 268 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 C14orf132Q9NPU4 83 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 TMEM216Q9P0N5 145 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 SLC35A3Q9Y2D2 325 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 ITPR2Q14571 2701 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 CFAP46Q8IYW2 2715 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 PLXNA1Q9UIW2 1896 aa-3.11□□□□□ -2.91
TRAJ9-201ENST00000390528 PLXNB2O15031 1838 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 SIPA1L3O60292 1781 aaPredicted RBP-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 MYH7BA7E2Y1 1941 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 TRGV1A0A0A0MS02 117 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 A0A1B0GX12 115 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 PRPSAP2O60256 369 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 APODP05090 189 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 ARR3P36575 388 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 CSN1S1P47710 185 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 UBE2MP61081 183 aaKnown RBP-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 CBX3Q13185 183 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 OR52K2Q8NGK3 314 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 OR51Q1Q8NH59 317 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 OR5K1Q8NHB7 308 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 OPALINQ96PE5 141 aa-3.12□□□□□ -2.91
TRAJ9-201ENST00000390528 FXYD6-FXYD2A0A087WZ82 144 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 TRAV10A0A0B4J240 114 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 C8orf87E5RJ46 101 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 GOLGA8RI6L899 631 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 ZNF701M0R085 212 aaPredicted RBP-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 CST1P01037 141 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 TTPAP49638 278 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 KHDC3LQ587J8 217 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 CTSL3PQ5NE16 218 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 SYPL2Q5VXT5 272 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 RASSF6Q6ZTQ3 369 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 GPHB5Q86YW7 130 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 C5orf17Q8NAS9 161 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 GPER1Q99527 375 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 PSME2Q9UL46 239 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 SSC5DA1L4H1 1573 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 DOCK11Q5JSL3 2073 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 TRIOO75962 3097 aa-3.13□□□□□ -2.91
TRAJ9-201ENST00000390528 FRYQ5TBA9 3013 aa-3.14□□□□□ -2.91
TRAJ9-201ENST00000390528 CSMD1Q96PZ7 3565 aa-3.14□□□□□ -2.91
TRAJ9-201ENST00000390528 ATP5DP30049 168 aa-3.14□□□□□ -2.91
TRAJ9-201ENST00000390528 RPL18Q07020 188 aaKnown RBP-3.14□□□□□ -2.91
TRAJ9-201ENST00000390528 IQCJQ1A5X6 159 aa-3.14□□□□□ -2.91
TRAJ9-201ENST00000390528 AADACL3Q5VUY0 350 aa-3.14□□□□□ -2.91
TRAJ9-201ENST00000390528 SSX8Q7RTT4 187 aa-3.14□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms