RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 NUP37Q8NFH4 326 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 OR51E1Q8TCB6 317 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 MRPL30Q8TCC3 161 aaKnown RBP6.17□□□□□ -1.42
TRBV28-201ENST00000390400 FAM216AQ8WUB2 273 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 ALKBH7Q9BT30 221 aaPredicted RBP6.17□□□□□ -1.42
TRBV28-201ENST00000390400 GNB1LQ9BYB4 327 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 PARLQ9H300 379 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 BANF2Q9H503 90 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 TUBG2Q9NRH3 451 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 KCNIP2Q9NS61 270 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 SLC39A9Q9NUM3 307 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 ST3GAL6Q9Y274 331 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 TBL2Q9Y4P3 447 aaKnown RBP6.17□□□□□ -1.42
TRBV28-201ENST00000390400 ABCA12Q86UK0 2595 aa6.17□□□□□ -1.42
TRBV28-201ENST00000390400 HECTD1Q9ULT8 2610 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 UTP20O75691 2785 aaKnown RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ARFGEF3Q5TH69 2177 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 IGHV2-26A0A0B4J1V2 119 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 C5orf63A6NC05 138 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 CBY3A6NI87 242 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZFP92A6NM28 416 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 C17orf100A8MU93 164 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF253O75346 499 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 MPDU1O75352 247 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 PPYP01298 95 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 HLA-DRB1P01911 266 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 OR5G3P0C626 314 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 OR10J4P0C629 311 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 IGLC2P0DOY2 106 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 IGLC3P0DOY3 106 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 EGR2P11161 476 aaPredicted RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 IL3RAP26951 378 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 GLRXP35754 106 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 HNRNPA3P51991 378 aaKnown RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 RPP30P78346 268 aaKnown RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 PSG3Q16557 428 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF718Q3SXZ3 478 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF672Q499Z4 452 aaPredicted RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF880Q6PDB4 577 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 Q6ZWC4 215 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 MRPL21Q7Z2W9 205 aaKnown RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 SELENOHQ8IZQ5 122 aaKnown RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 OR2AE1Q8NHA4 323 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 SLC25A40Q8TBP6 338 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 LHX4Q969G2 390 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 PERPQ96FX8 193 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 REEP6Q96HR9 211 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 WDR61Q9GZS3 305 aaKnown RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF442Q9H7R0 627 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF665Q9H7R5 613 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF319Q9P2F9 582 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 SLC25A10Q9UBX3 287 aaPredicted RBP6.16□□□□□ -1.42
TRBV28-201ENST00000390400 DSCAMO60469 2012 aa6.16□□□□□ -1.42
TRBV28-201ENST00000390400 USF3Q68DE3 2245 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 IGKV1-9A0A0C4DH69 117 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 hCG_38984A0A1B0GV85 526 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 SH2D7A6NKC9 451 aaPredicted RBP6.15□□□□□ -1.42
TRBV28-201ENST00000390400 C9JCJ5 164 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 IFNL4K9M1U5 179 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 CDIPTO14735 213 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 SSSCA1O60232 199 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 PLAUP00749 431 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 GYPAP02724 150 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 CRISP2P16562 243 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 SELEP16581 610 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 TMEM11P17152 192 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 GZMHP20718 246 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 ANOS1P23352 680 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 GCH1P30793 250 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 MPV17P39210 176 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 GABRA2P47869 451 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 FABP6P51161 128 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 SELENOVP59797 346 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 ERVS71-1P61550 626 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 SPIN3Q5JUX0 258 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 MRPL54Q6P161 138 aaKnown RBP6.15□□□□□ -1.42
TRBV28-201ENST00000390400 ZNF525Q8N782 197 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 SIGLECL1Q8N7X8 197 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 OR4C5Q8NGB2 326 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 OR5D18Q8NGL1 313 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 KLF14Q8TD94 323 aaPredicted RBP6.15□□□□□ -1.42
TRBV28-201ENST00000390400 TMEM37Q8WXS4 190 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 TMEM190Q8WZ59 177 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 TAF15Q92804 592 aaKnown RBP eCLIP6.15□□□□□ -1.42
TRBV28-201ENST00000390400 RPUSD4Q96CM3 377 aaKnown RBP6.15□□□□□ -1.42
TRBV28-201ENST00000390400 LYZL4Q96KX0 146 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 Q96MF0 132 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 CSTL1Q9H114 145 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 FZR1Q9UM11 496 aa6.15□□□□□ -1.42
TRBV28-201ENST00000390400 CACNA1DQ01668 2161 aa6.15□□□□□ -1.43
TRBV28-201ENST00000390400 ARID1AO14497 2285 aa6.15□□□□□ -1.43
TRBV28-201ENST00000390400 MDFIC2A0A1B0GVS7 189 aa6.14□□□□□ -1.43
TRBV28-201ENST00000390400 CD300LBA8K4G0 201 aa6.14□□□□□ -1.43
TRBV28-201ENST00000390400 E7EQL1 145 aa6.14□□□□□ -1.43
TRBV28-201ENST00000390400 H3BSH0 61 aa6.14□□□□□ -1.43
TRBV28-201ENST00000390400 SYNGR2O43760 224 aa6.14□□□□□ -1.43
TRBV28-201ENST00000390400 TIMM8AO60220 97 aaPredicted RBP6.14□□□□□ -1.43
TRBV28-201ENST00000390400 S1PR2O95136 353 aa6.14□□□□□ -1.43
TRBV28-201ENST00000390400 KITLGP21583 273 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms