RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
ALK-201ENST00000389048 ZNF257Q9Y2Q1 563 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 SHISA3A0PJX4 238 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 CCL3L1P16619 93 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 RAB9AP51151 201 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 PAPPA-AS1Q5QFB9 102 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 STHQ8IWL8 128 aa13.07□□□□□ -0.32
ALK-201ENST00000389048 LYNX1G3V0Z9 82 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 LYNX1P0DP58 116 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
ALK-201ENST00000389048 HBDP02042 147 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 LRTM2Q8N967 370 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 BCORQ6W2J9 1755 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 A0A087WV48 116 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 TDGF1P3P51864 188 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 ZNF837Q96EG3 531 aaPredicted RBP13.06□□□□□ -0.32
ALK-201ENST00000389048 KIAA1217Q5T5P2 1943 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 TMEM14DPA8MWL7 114 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 H7C1H1 209 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 RAMP3O60896 148 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 HIST1H4AP62805 103 aaKnown RBP13.06□□□□□ -0.32
ALK-201ENST00000389048 FHL5Q5TD97 284 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
ALK-201ENST00000389048 IZUMO1RA6ND01 250 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 ATP5LO75964 103 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 FOXL1Q12952 345 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 COLCA1Q6ZS62 124 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 SIGMAR1Q99720 223 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
ALK-201ENST00000389048 MCM3APO60318 1980 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 NDUFA2O43678 99 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
ALK-201ENST00000389048 ZNF585BQ52M93 769 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 VCX2Q9H322 139 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 WISP3O95389 354 aaPredicted RBP13.05□□□□□ -0.32
ALK-201ENST00000389048 PRTN3P24158 256 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A10PA6NDY2 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A18PA6NE21 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A16PA6NEW6 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A20PA6NIJ5 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A8PA6NJQ4 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 ORMDL3Q8N138 153 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 DNAJC13O75165 2243 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 ZNF124Q15973 351 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 SLC25A15Q9Y619 301 aa13.05□□□□□ -0.32
ALK-201ENST00000389048 SLC25A20O43772 301 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 CECR9P0C854 216 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 LINC01590Q5TEZ4 76 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 ASCL2Q99929 193 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 HOXA3O43365 443 aaPredicted RBP13.04□□□□□ -0.32
ALK-201ENST00000389048 SAXO1Q8IYX7 474 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
ALK-201ENST00000389048 ST20Q9HBF5 79 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 YAE1D1Q9NRH1 226 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 AHDC1Q5TGY3 1603 aaPredicted RBP13.04□□□□□ -0.32
ALK-201ENST00000389048 CD28P10747 220 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 CD300EQ496F6 205 aaPredicted RBP13.04□□□□□ -0.32
ALK-201ENST00000389048 C7orf69Q9H7B7 122 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 GDF15Q99988 308 aa13.04□□□□□ -0.32
ALK-201ENST00000389048 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
ALK-201ENST00000389048 APOBEC3AP31941 199 aaPredicted RBP13.03□□□□□ -0.32
ALK-201ENST00000389048 RPL23P62829 140 aaKnown RBP13.03□□□□□ -0.32
ALK-201ENST00000389048 UNQ9370/PRO34162Q6UXP9 181 aa13.03□□□□□ -0.32
ALK-201ENST00000389048 SAP25Q8TEE9 199 aa13.03□□□□□ -0.32
ALK-201ENST00000389048 C19orf24Q9BVV8 132 aa13.03□□□□□ -0.32
ALK-201ENST00000389048 ZNF625Q96I27 306 aaPredicted RBP13.03□□□□□ -0.32
ALK-201ENST00000389048 TGFBR3LH3BV60 316 aa13.03□□□□□ -0.32
ALK-201ENST00000389048 FOXH1O75593 365 aa13.03□□□□□ -0.32
ALK-201ENST00000389048 PILRBQ9UKJ0 227 aa13.03□□□□□ -0.32
ALK-201ENST00000389048 LCNL1Q6ZST4 164 aa13.02□□□□□ -0.32
ALK-201ENST00000389048 CRIM1Q9NZV1 1036 aa13.02□□□□□ -0.32
ALK-201ENST00000389048 TRAV5A0A0B4J249 113 aa13.02□□□□□ -0.32
ALK-201ENST00000389048 EFEMP2O95967 443 aa13.02□□□□□ -0.32
ALK-201ENST00000389048 LINC00158P58513 81 aa13.02□□□□□ -0.32
ALK-201ENST00000389048 OR2K2Q8NGT1 345 aa13.02□□□□□ -0.32
ALK-201ENST00000389048 TDRD6O60522 2096 aaKnown RBP13.02□□□□□ -0.33
ALK-201ENST00000389048 SAA2-SAA4A0A096LPE2 208 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 UMODP07911 640 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 SAA2P0DJI9 122 aaPredicted RBP13.02□□□□□ -0.33
ALK-201ENST00000389048 TRAV14DV4A0A0A6YYC5 116 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 KNL1Q8NG31 2342 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 C5orf67F2Z3F1 127 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 GTSCR1Q86UQ5 136 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 VSIRQ9H7M9 311 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 ALS2Q96Q42 1657 aa13.02□□□□□ -0.33
ALK-201ENST00000389048 B9A039 149 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
ALK-201ENST00000389048 SFXN3Q9BWM7 321 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms