RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 C9orf163Q8N9P6 203 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 MAP1LC3AQ9H492 121 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 PLEKHJ1Q9NW61 149 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 BAIAP2Q9UQB8 552 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 FUT9Q9Y231 359 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 COQ4Q9Y3A0 265 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 GMEB1Q9Y692 573 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 TLN1Q9Y490 2541 aaKnown RBP0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 EIF4G1Q04637 1599 aaKnown RBP0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 TONSLQ96HA7 1378 aa0.7□□□□□ -2.3
RNU6-39P-201ENST00000384344 EYSQ5T1H1 3165 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 HMGXB3Q12766 1538 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 TLN2Q9Y4G6 2542 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 INTS1Q8N201 2190 aaKnown RBP0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 MYH11P35749 1972 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 PCDH15Q96QU1 1955 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 SMARCA4P51532 1647 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 GGT3PA6NGU5 568 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 LST1O00453 97 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 SHBGP04278 402 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 TYMSP04818 313 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 UCHL3P15374 230 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 MYL12AP19105 171 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 CD151P48509 253 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 EIF2B2P49770 351 aaKnown RBP0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 CTAG1AP78358 180 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 TNFAIP6P98066 277 aaPredicted RBP0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 RSU1Q15404 277 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 AAED1Q7RTV5 226 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 TMEM161BQ8NDZ6 487 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 WFDC11Q8NEX6 87 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 OR5B17Q8NGF7 314 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 C11orf40Q8WZ69 217 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 DIRAS2Q96HU8 199 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 PAQR5Q9NXK6 330 aaPredicted RBP0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 C22orf24Q9Y442 160 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 PIEZO2Q9H5I5 2752 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 SETD5Q9C0A6 1442 aa0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 BAZ2BQ9UIF8 2168 aaKnown RBP0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 SPTAN1Q13813 2472 aaKnown RBP0.69□□□□□ -2.3
RNU6-39P-201ENST00000384344 RANBP2P49792 3224 aaKnown RBP0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 BSNQ9UPA5 3926 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 A0A0A6YYH2 397 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 C1orf232A0A0U1RR37 186 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 A0A1B0GV50 99 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 A6NJ64 397 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 TMEM212A6NML5 194 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 FABP5P3A8MUU1 101 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 TRAPPC2LH3BP13 241 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 FAM228BP0C875 321 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 OCM2P0CE71 109 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 RUNX1Q01196 453 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 STX5Q13190 355 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 TEX36Q5VZQ5 186 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 ZNF565Q8N9K5 539 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 GPR32P1Q8NGA4 272 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 OR4C6Q8NH72 309 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 CFAP53Q96M91 514 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 DRC3Q9H069 523 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 BRWD1Q9NSI6 2320 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 FGFR1OP2Q9NVK5 253 aa0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 CNOT1A5YKK6 2376 aaKnown RBP0.68□□□□□ -2.3
RNU6-39P-201ENST00000384344 EP300Q09472 2414 aaPredicted RBP0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 M0QX08 132 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 OR5F1O95221 314 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 REG1AP05451 166 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 RPS4Y1P22090 263 aaKnown RBP0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 RPL12P30050 165 aaKnown RBP0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 IBA57Q5T440 356 aaKnown RBP0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 OGFRL1Q5TC84 451 aaPredicted RBP0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 MCFD2Q8NI22 146 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 PIGXQ8TBF5 258 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 AQP3Q92482 292 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 TMEM106AQ96A25 262 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 OR8D2Q9GZM6 311 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 HDHD2Q9H0R4 259 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 IMP3Q9NV31 184 aaKnown RBP0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 IL36BQ9NZH7 164 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 C3orf18Q9UK00 162 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 STAB2Q8WWQ8 2551 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 ABCC11Q96J66 1382 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 BOD1L1Q8NFC6 3051 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 CPAMD8Q8IZJ3 1885 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 NAV1Q8NEY1 1877 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 HERC2O95714 4834 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 ZDBF2Q9HCK1 2354 aa0.67□□□□□ -2.3
RNU6-39P-201ENST00000384344 MYOFQ9NZM1 2061 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 NBEAQ8NFP9 2946 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 PTPRSQ13332 1948 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 DLG5Q8TDM6 1919 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 A0A087WX48 190 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 SLC16A4O15374 487 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 PRM2P04554 102 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 C8orf88P0DMB2 117 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 CCL1P22362 96 aa0.66□□□□□ -2.3
RNU6-39P-201ENST00000384344 BLVRAP53004 296 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms