RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 PARLQ9H300 379 aa10.15□□□□□ -0.79
GABPB1-203ENST00000380877 HSPB7Q9UBY9 170 aa10.15□□□□□ -0.79
GABPB1-203ENST00000380877 TMSB15BA0A087X1C1 80 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 ZNF253O75346 499 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 OR2J3O76001 311 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 OR2D3Q8NGH3 330 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 LOC102723971A0A1B0GUV8 181 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 E7EQL1 145 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 TMEM250H0YL14 139 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 SLC31A2O15432 143 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 CD24P25063 80 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 NMSQ5H8A3 153 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 ZNF506Q5JVG8 444 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 PRSS3P2Q8NHM4 247 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 PMS2P11Q13670 270 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 Q6ZR03 302 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 PPP1R27Q86WC6 154 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 GBGT1Q8N5D6 347 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 GAFA1Q96PS6 74 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 RPL7P18124 248 aaKnown RBP10.14□□□□□ -0.79
GABPB1-203ENST00000380877 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
GABPB1-203ENST00000380877 PAFAH1B2P68402 229 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 WDR25Q64LD2 544 aaPredicted RBP10.14□□□□□ -0.79
GABPB1-203ENST00000380877 IGF2-ASQ6U949 168 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 TNFRSF14Q92956 283 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 AUP1Q9Y679 476 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 S4R3C0 116 aa10.14□□□□□ -0.79
GABPB1-203ENST00000380877 SEC14L6B5MCN3 397 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 NBR2O15453 112 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 TGFAP01135 160 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 IGKV1-5P01602 117 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 MFAP2P55001 183 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 IGFL2Q6UWQ7 119 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 RNASEH2CQ8TDP1 164 aaKnown RBP10.13□□□□□ -0.79
GABPB1-203ENST00000380877 SRSF12Q8WXF0 261 aaKnown RBP10.13□□□□□ -0.79
GABPB1-203ENST00000380877 IGLV3-1P01715 115 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 AMTP48728 403 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 EFNA4P52798 201 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 ATP5G2Q06055 141 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 TMEM144Q7Z5S9 345 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 A8MXK9 166 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 RIGQ13278 110 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 LINC00305Q7Z4B0 112 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 ARPC1AQ92747 370 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 A0A1W2PS18 150 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 TIMM23O14925 209 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 IGHV1-8P0DP01 117 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 ZNF137PP52743 207 aa10.13□□□□□ -0.79
GABPB1-203ENST00000380877 IBA57Q5T440 356 aaKnown RBP10.13□□□□□ -0.79
GABPB1-203ENST00000380877 A8MWL6 223 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 F5H697 171 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 K7EM74 188 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 IGLV1-44P01699 117 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 GATA2P23769 480 aaPredicted RBP10.12□□□□□ -0.79
GABPB1-203ENST00000380877 DYNLRB2Q8TF09 96 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 MBNL3Q9NUK0 354 aaKnown RBP10.12□□□□□ -0.79
GABPB1-203ENST00000380877 UFC1Q9Y3C8 167 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 LY6HO94772 140 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 CRIM1Q9NZV1 1036 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 IGKV1-6A0A0C4DH72 117 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 FAM90A9PA6NNJ1 464 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 CSN3P07498 182 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 PRCDQ00LT1 54 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 EEF1AKMT3Q96AZ1 226 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 C16orf92Q96LL3 132 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 IGHV2-26A0A0B4J1V2 119 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 C1QTNF9BB2RNN3 333 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 C1QTNF9P0C862 333 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 FAM3BP58499 235 aaPredicted RBP10.12□□□□□ -0.79
GABPB1-203ENST00000380877 WDR86Q86TI4 376 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 IFT22Q9H7X7 185 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 WFDC1Q9HC57 220 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 C21orf62Q9NYP8 219 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 FBXL7Q9UJT9 491 aa10.12□□□□□ -0.79
GABPB1-203ENST00000380877 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 TOMM20LQ6UXN7 152 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 WNT10AQ9GZT5 417 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 NCOA6Q14686 2063 aaPredicted RBP10.11□□□□□ -0.79
GABPB1-203ENST00000380877 PIEZO2Q9H5I5 2752 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
GABPB1-203ENST00000380877 ID1P41134 155 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 C3orf36Q3SXR2 165 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 TEX45Q8NA69 505 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 SGK494Q96LW2 274 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
GABPB1-203ENST00000380877 ARL2-SNX15V9GYD0 113 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 LINC00473A8K010 186 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 TRGV3P03979 118 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 TFPI2P48307 235 aa10.11□□□□□ -0.79
GABPB1-203ENST00000380877 ISLRO14498 428 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 BET1LQ9NYM9 111 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 YLPM1P49750 1951 aaKnown RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 CEACAM4O75871 244 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 CGAP01215 116 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 LMO1P25800 156 aa10.1□□□□□ -0.79
GABPB1-203ENST00000380877 HOXA4Q00056 320 aaPredicted RBP10.1□□□□□ -0.79
GABPB1-203ENST00000380877 FAM106AQ4KMX7 169 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms