RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ZNF318Q5VUA4 2279 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 LINC01551Q86U37 167 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 LINC01465Q8N7H1 131 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 PRNDQ9UKY0 176 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 MPC1Q9Y5U8 109 aa9.16□□□□□ -0.94
CLCN4-202ENST00000380833 PDLIM4P50479 330 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 CXorf66Q5JRM2 361 aaPredicted RBP9.15□□□□□ -0.94
CLCN4-202ENST00000380833 CCDC144NLQ6NUI1 221 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 SMPXQ9UHP9 88 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 TOGARAM1Q9Y4F4 1720 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 A0A1B0GW64 132 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 MGST3O14880 152 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
CLCN4-202ENST00000380833 ETDBQ3ZM63 59 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 MRPL20Q9BYC9 149 aaKnown RBP9.15□□□□□ -0.94
CLCN4-202ENST00000380833 CEACAM18A8MTB9 384 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 IL6RP08887 468 aaPredicted RBP9.15□□□□□ -0.94
CLCN4-202ENST00000380833 C1orf53Q5VUE5 145 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 C9orf40Q8IXQ3 194 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 C1orf162Q8NEQ5 155 aaPredicted RBP9.15□□□□□ -0.94
CLCN4-202ENST00000380833 PGPA6NDG6 321 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 MSGN1A6NI15 193 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 C9JAW5 83 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 M0R2P5 195 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 VSIG8P0DPA2 414 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 ANOS1P23352 680 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 GCHFRP30047 84 aa9.15□□□□□ -0.94
CLCN4-202ENST00000380833 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
CLCN4-202ENST00000380833 SRD5A1P18405 259 aa9.15□□□□□ -0.95
CLCN4-202ENST00000380833 LEPP41159 167 aa9.15□□□□□ -0.95
CLCN4-202ENST00000380833 IGHV2-70DA0A0C4DH43 119 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 EGR1P18146 543 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 CX3CL1P78423 397 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 TCRBV5S1A1TA0A578 114 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 C1QAP02745 245 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 FAM201AQ5SY85 155 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 FBXL15Q9H469 300 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 TMEM56-RWDD3S4R434 201 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 SSC5DA1L4H1 1573 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 PCM1Q15154 2024 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 NPFFO15130 113 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 TMEM256Q8N2U0 113 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 SLC25A28Q96A46 364 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 RPRMQ9NS64 109 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 TRBV5-4A0A0C4DH59 114 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 FAM90A26D6RGX4 464 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 IGLV3-25P01717 112 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 IGHV2-5P01817 119 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 MRPL23Q16540 153 aaKnown RBP9.14□□□□□ -0.95
CLCN4-202ENST00000380833 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 TMEM174Q8WUU8 243 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 SLC25A38Q96DW6 304 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 KIR2DL4Q99706 377 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 C19orf24Q9BVV8 132 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 C5orf66Q9H5L9 145 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 IGHV2OR16-5A0A0B4J2B6 119 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 A0A1W2PRE2 83 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 EPOPA6NHQ4 379 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 MIC13Q5XKP0 118 aa9.14□□□□□ -0.95
CLCN4-202ENST00000380833 RPL27AP46776 148 aaKnown RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 ZIC1Q15915 447 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 FAM106AQ4KMX7 169 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 AQP3Q92482 292 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 RNF115Q9Y4L5 304 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 ALS2Q96Q42 1657 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 HS3ST3B1Q9Y662 390 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 STRCQ7RTU9 1775 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 CD24P25063 80 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 ZNF703Q9H7S9 590 aaPredicted RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 NOVP48745 357 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 RHOGP84095 191 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 TMEM52Q8NDY8 209 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 RPP21Q9H633 154 aaKnown RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 TMEM74BQ9NUR3 256 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 ECM29Q5VYK3 1845 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 ZNF638Q14966 1978 aaKnown RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 FOXI3A8MTJ6 420 aaPredicted RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 TRGV3P03979 118 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 MESP2Q0VG99 397 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 VKORC1Q9BQB6 163 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 PKIGQ9Y2B9 76 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 SNRNP200O75643 2136 aaKnown RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 SCO2A0A1W2PP80 73 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 IGLC2P0DOY2 106 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 COQ2Q96H96 371 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 DUX3Q96PT4 197 aa9.13□□□□□ -0.95
CLCN4-202ENST00000380833 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
CLCN4-202ENST00000380833 C1QCP02747 245 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 SAA1P0DJI8 122 aaPredicted RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 DUSP15Q9H1R2 295 aaPredicted RBP9.12□□□□□ -0.95
CLCN4-202ENST00000380833 MMP23AO75900 390 aa9.12□□□□□ -0.95
CLCN4-202ENST00000380833 DICER1Q9UPY3 1922 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms