RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 FAM216BQ8N7L0 139 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM186Q96B77 213 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 ATG101Q9BSB4 218 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 UFC1Q9Y3C8 167 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 TBL2Q9Y4P3 447 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 AMBPP02760 352 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 LGALS7P47929 136 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 CDC42EP3Q9UKI2 254 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 YPEL1O60688 119 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 DUTP33316 252 aaKnown RBP10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM14EPQ6UXP3 125 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM144Q7Z5S9 345 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 YPEL2Q96QA6 119 aa10.64□□□□□ -0.71
DNMT3A-204ENST00000380756 TRAV9-1A0A075B6T8 112 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 SERF1AO75920 110 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 B3GALT5-AS1P59052 145 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 MORN2Q502X0 79 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 Q6ZRM9 215 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 LIME1Q9H400 295 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 RBFOX2O43251 390 aaKnown RBP eCLIP10.63□□□□□ -0.712e-6■■□□□ 12.3
DNMT3A-204ENST00000380756 OCC1Q8TAD7 63 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 MOSP00540 346 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 FOXA3P55318 350 aaPredicted RBP10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 RPL30P62888 115 aaKnown RBP10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
DNMT3A-204ENST00000380756 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 LILRA1O75019 489 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 C9orf106Q8NAJ2 232 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM116Q8NCL8 245 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 OR9G9P0C7N8 305 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 FOXF2Q12947 444 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 LINC00305Q7Z4B0 112 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 TRBV6-6A0A0A6YYG2 114 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 OR2T8A6NH00 312 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 HOXA4Q00056 320 aaPredicted RBP10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 C10orf91Q5T1B1 145 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 PEAR1Q5VY43 1037 aaPredicted RBP10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 FAM90A1Q86YD7 464 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM106BQ9NUM4 274 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 HILPDAQ9Y5L2 63 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 PIEZO1Q92508 2521 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 A6NDN8 102 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 NBEAP1P0C6P0 100 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 TEX38Q6PEX7 206 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 SRSF12Q8WXF0 261 aaKnown RBP10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 HS3ST6Q96QI5 342 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 WNT10AQ9GZT5 417 aa10.62□□□□□ -0.71
DNMT3A-204ENST00000380756 IL18BPO95998 194 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 COMPP49747 757 aaPredicted RBP10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 Q0VFX4 171 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 FAM90A2PQ658T7 463 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 CACNG8Q8WXS5 425 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 CLEC5AQ9NY25 188 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM50AO95807 157 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 COTL1Q14019 142 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 SLC25A34Q6PIV7 304 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 BMPERQ8N8U9 685 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 EFNB3Q15768 340 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 RSPO1Q2MKA7 263 aaPredicted RBP10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 CCDC144NLQ6NUI1 221 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 EAF1Q96JC9 268 aaPredicted RBP10.61□□□□□ -0.71
DNMT3A-204ENST00000380756 SAA2-SAA4A0A096LPE2 208 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 TMEM189A5PLL7 270 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 TM4SF5O14894 197 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 SS18L1O75177 396 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 SAA2P0DJI9 122 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 ADMP35318 185 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 FAM27E3Q08E93 113 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 IL15RAQ13261 267 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 RNASE7Q9H1E1 156 aaKnown RBP10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 PEX7O00628 323 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 HBBP68871 147 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 TREML4Q6UXN2 200 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 LINC01551Q86U37 167 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 OR4A5Q8NH83 315 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 PRR7Q8TB68 274 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 NEU1Q99519 415 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 GOSR1O95249 250 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 TBR1Q16650 682 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 ACSF3Q4G176 576 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 GGTLC1Q9BX51 225 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 FCGR2BP31994 310 aaPredicted RBP10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 SPRR3Q9UBC9 169 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 ZFP30Q9Y2G7 519 aa10.6□□□□□ -0.71
DNMT3A-204ENST00000380756 STAG3L2P0CL84 134 aa10.59□□□□□ -0.71
DNMT3A-204ENST00000380756 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
DNMT3A-204ENST00000380756 TCTAP57738 103 aa10.59□□□□□ -0.71
DNMT3A-204ENST00000380756 GRAMD2BQ96HH9 432 aa10.59□□□□□ -0.71
DNMT3A-204ENST00000380756 SLC25A33Q9BSK2 321 aa10.59□□□□□ -0.71
DNMT3A-204ENST00000380756 USF3Q68DE3 2245 aa10.59□□□□□ -0.71
DNMT3A-204ENST00000380756 Q6P435 159 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms