RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TRAPPC2P0DI81 140 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 TRAPPC2BP0DI82 140 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 SPP1P10451 314 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 CALRP27797 417 aaKnown RBP12.42□□□□□ -0.42
HMGN1-203ENST00000380748 TAS2R31P59538 309 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 SPHARQ15513 63 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-203ENST00000380748 AIFM2Q9BRQ8 373 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 S100A14Q9HCY8 104 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 PLCXD1Q9NUJ7 323 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
HMGN1-203ENST00000380748 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 APOHP02749 345 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-203ENST00000380748 POU2AF1Q16633 256 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 ZNF773Q6PK81 442 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 CSNK1G2-AS1Q8NCQ2 148 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 CCL28Q9NRJ3 127 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 TMEM14BQ9NUH8 114 aa12.41□□□□□ -0.42
HMGN1-203ENST00000380748 IGHV3-66A0A0C4DH42 116 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 TEX50A0A1B0GTY4 177 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 SULT1C2O00338 296 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 RBFOX2O43251 390 aaKnown RBP eCLIP12.4□□□□□ -0.421e-18■□□□□ 8.3
HMGN1-203ENST00000380748 NQO2P16083 231 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 RPL11P62913 178 aaKnown RBP12.4□□□□□ -0.42
HMGN1-203ENST00000380748 THOC7Q6I9Y2 204 aaKnown RBP12.4□□□□□ -0.42
HMGN1-203ENST00000380748 CNIH2Q6PI25 160 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 HSD17B13Q7Z5P4 300 aaPredicted RBP12.4□□□□□ -0.42
HMGN1-203ENST00000380748 UFD1Q92890 307 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 HINT2Q9BX68 163 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 VSIRQ9H7M9 311 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 RABAC1Q9UI14 185 aa12.4□□□□□ -0.42
HMGN1-203ENST00000380748 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 HPRT1P00492 218 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 EIF4EP06730 217 aaKnown RBP12.39□□□□□ -0.43
HMGN1-203ENST00000380748 FGF2P09038 288 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 DHRSXQ8N5I4 330 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 OR1L8Q8NGR8 309 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 NUDCD2Q8WVJ2 157 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
HMGN1-203ENST00000380748 NXF2Q9GZY0 626 aaKnown RBP12.39□□□□□ -0.43
HMGN1-203ENST00000380748 NDUFA4L2Q9NRX3 87 aa12.39□□□□□ -0.43
HMGN1-203ENST00000380748 CD5P06127 495 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 RAB6AP20340 208 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 NPY1RP25929 384 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 RANBP1P43487 201 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 OR10A3P58181 314 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 CDNFQ49AH0 187 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 UBE2UQ5VVX9 321 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 C8orf59Q8N0T1 100 aaPredicted RBP12.38□□□□□ -0.43
HMGN1-203ENST00000380748 KRTAP3-3Q9BYR6 98 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 DCSTAMPQ9H295 470 aa12.38□□□□□ -0.43
HMGN1-203ENST00000380748 ERICH4A6NGS2 130 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 IGHV3-48P01763 117 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 FABP5Q01469 135 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 HACD4Q5VWC8 232 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 TOMM20LQ6UXN7 152 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 DUSP18Q8NEJ0 188 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 ANXA10Q9UJ72 324 aa12.37□□□□□ -0.43
HMGN1-203ENST00000380748 METTL21EPA6NDL7 271 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 PTHLHP12272 177 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 MFAP4P55083 255 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 MSMO1Q15800 293 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 RNF212Q495C1 297 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 C10orf67Q8IYJ2 551 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 OR13F1Q8NGS4 319 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 GINS3Q9BRX5 216 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 ATG5Q9H1Y0 275 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
HMGN1-203ENST00000380748 TMEM235A6NFC5 223 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 PTGES3LE9PB15 166 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 I3L2K1 104 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 K7EQG2 157 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 HSMCR30P0CW71 290 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 CATR1Q13166 79 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 MISP3Q96FF7 219 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 PLEKHA2Q9HB19 425 aa12.35□□□□□ -0.43
HMGN1-203ENST00000380748 SSX5O60225 188 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 FCGR2CP31995 323 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 ARL6IP1Q15041 203 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 TRAM1Q15629 374 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 STXBP6Q8NFX7 210 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 SLC5A7Q9GZV3 580 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 ZFAND3Q9H8U3 227 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 COMMD9Q9P000 198 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 OR51B2Q9Y5P1 312 aa12.34□□□□□ -0.43
HMGN1-203ENST00000380748 MARCH11A6NNE9 402 aa12.33□□□□□ -0.44
HMGN1-203ENST00000380748 MT-CO2P00403 227 aa12.33□□□□□ -0.44
HMGN1-203ENST00000380748 PSMA1P25786 263 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms