RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LHFPL1Q86WI0 220 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 ABCA4P78363 2273 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 DCTN5Q9BTE1 182 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 SCN8AQ9UQD0 1980 aa12.63□□□□□ -0.39
NPHP4-201ENST00000378156 PCNX1Q96RV3 2341 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 ZNF324O75467 553 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-201ENST00000378156 MFAP4P55083 255 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 A1L4Q6 167 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 ID1P41134 155 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 ZNF524Q96C55 264 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 C18orf12Q96KH6 178 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 MRPL32Q9BYC8 188 aaKnown RBP12.62□□□□□ -0.39
NPHP4-201ENST00000378156 LINC00587B1AMM8 73 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 SMIM13P0DJ93 91 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 FOXG1P55316 489 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-201ENST00000378156 ZNF146Q15072 292 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 DYNLRB2Q8TF09 96 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 REG4Q9BYZ8 158 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 KBTBD11-OT1A0A1B0GTJ5 212 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 CRYBB3P26998 211 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 KIAA1644Q3SXP7 199 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 PNRC2Q9NPJ4 139 aaKnown RBP12.62□□□□□ -0.39
NPHP4-201ENST00000378156 PLXND1Q9Y4D7 1925 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
NPHP4-201ENST00000378156 HTN1P15515 57 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 NEU4Q8WWR8 484 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-201ENST00000378156 COPS9Q8WXC6 57 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 RBFOX2O43251 390 aaKnown RBP eCLIP12.61□□□□□ -0.395e-8■■■■■ 28.4
NPHP4-201ENST00000378156 SRP19P09132 144 aaKnown RBP12.61□□□□□ -0.39
NPHP4-201ENST00000378156 FXYD3Q14802 87 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 NIT1Q86X76 327 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 IGKV1-27A0A075B6S5 117 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 Q0VFX4 171 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 OSR1Q8TAX0 266 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-201ENST00000378156 RNASE6Q93091 150 aaKnown RBP12.61□□□□□ -0.39
NPHP4-201ENST00000378156 NDUFAF3Q9BU61 184 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 REG1AP05451 166 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 OR51G1Q8NGK1 321 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 GATAD1Q8WUU5 269 aa12.61□□□□□ -0.39
NPHP4-201ENST00000378156 C17orf98A8MV24 154 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 MEF2CQ06413 473 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-201ENST00000378156 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 PLPPR1Q8TBJ4 325 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 PLXNA4Q9HCM2 1894 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 NPIPB6E9PJ23 425 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 QRFPP83859 136 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 DPM3Q9P2X0 92 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 NPIPB3Q92617 1050 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 CYTL1Q9NRR1 136 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 ABCA1O95477 2261 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 IL4P05112 153 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 HBBP68871 147 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 TEX29Q8N6K0 151 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 WFDC1Q9HC57 220 aa12.6□□□□□ -0.39
NPHP4-201ENST00000378156 HELZP42694 1942 aaKnown RBP12.6□□□□□ -0.39
NPHP4-201ENST00000378156 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 GCHFRP30047 84 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-201ENST00000378156 METTL26Q96S19 204 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 CCL19Q99731 98 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 CBLN1P23435 193 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 FCGR2BP31994 310 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-201ENST00000378156 OTX1P32242 354 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-201ENST00000378156 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-201ENST00000378156 TRBV6-7A0A0A0MS04 114 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 NUDT3O95989 172 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 IGHV3-48P01763 117 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 FOXF2Q12947 444 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 SRSF12Q8WXF0 261 aaKnown RBP12.59□□□□□ -0.39
NPHP4-201ENST00000378156 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 A0A1W2PS18 150 aa12.59□□□□□ -0.39
NPHP4-201ENST00000378156 LY6EQ16553 131 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 ATOH7Q8N100 152 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.58□□□□□ -0.4
NPHP4-201ENST00000378156 NPIPB11E5RHQ5 1161 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 E9PLN8 166 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 WDR82Q6UXN9 313 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 GTF3AQ92664 365 aaKnown RBP12.58□□□□□ -0.4
NPHP4-201ENST00000378156 NEUROG1Q92886 237 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 VKORC1Q9BQB6 163 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 PLXNA2O75051 1894 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 TRAV24A0A0B4J272 114 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 NABP2Q9BQ15 211 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 ZNF581Q9P0T4 197 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 H7C2G1 150 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 LGALS3P17931 250 aaKnown RBP12.58□□□□□ -0.4
NPHP4-201ENST00000378156 PSG9Q00887 426 aa12.58□□□□□ -0.4
NPHP4-201ENST00000378156 IGHV1-18A0A0C4DH31 117 aa12.57□□□□□ -0.4
NPHP4-201ENST00000378156 CENPWQ5EE01 88 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms