RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 RPEL1Q2QD12 228 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 GCSAMLQ5JQS6 135 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 MOGAT3Q86VF5 341 aa9.1□□□□□ -0.95
PCDHGA1-201ENST00000378105 DEFB108AA8MXU0 73 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 IGLL1P15814 213 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 TNXAQ16473 311 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 BVES-AS1Q5T3Y7 98 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 FADS6Q8N9I5 356 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR2K2Q8NGT1 345 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 MRPS16Q9Y3D3 137 aaKnown RBP9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 HRNRQ86YZ3 2850 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 A0A1W2PRD5 423 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 A0A1W2PRF3 423 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 A0A1W2PRM7 423 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 CHEK1O14757 476 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 MT-ATP8P03928 68 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 CLPSP04118 112 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 PFN1P07737 140 aaKnown RBP9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 ARHGEF39Q8N4T4 335 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR4F17Q8NGA8 305 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR51G1Q8NGK1 321 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 LINC01560Q8TB33 94 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 OR4F4Q96R69 305 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 JMJD8Q96S16 334 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 ST6GALNAC2Q9UJ37 374 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 SSTR5P35346 364 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 ETDBQ3ZM63 59 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 ACTL10Q5JWF8 245 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 FNDC7Q5VTL7 733 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 FAM166AQ6J272 317 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 EAF1Q96JC9 268 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 PECRQ9BY49 303 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 ZNF665Q9H7R5 613 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 CCDC168Q8NDH2 2452 aa9.09□□□□□ -0.95
PCDHGA1-201ENST00000378105 RND2P52198 227 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 SSBP2P81877 361 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 SCGB1C1Q8TD33 95 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 PLCE1Q9P212 2302 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 IGHV3-43A0A0B4J1X8 118 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 TMPRSS2O15393 492 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 SOCS1O15524 211 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 IGHV3-43DP0DP04 118 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 STUMQ69YW2 141 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 ASCL4Q6XD76 172 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 C9orf106Q8NAJ2 232 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 DLL3Q9NYJ7 618 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 M0R2Z0 102 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZNF708P17019 499 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 RPS20P60866 119 aaKnown RBP9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 LGI3Q8N145 548 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 OR10G9Q8NGN4 311 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 SPIN2AQ99865 258 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 SPIN2BQ9BPZ2 258 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 SAP30LQ9HAJ7 183 aa9.08□□□□□ -0.96
PCDHGA1-201ENST00000378105 PPIFP30405 207 aaKnown RBP9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 NBL1P41271 181 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 FOXG1P55316 489 aaPredicted RBP9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 PEAR1Q5VY43 1037 aaPredicted RBP9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 ADAMTSL5Q6ZMM2 481 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 ZNF826PQ6ZT77 177 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 SLC25A42Q86VD7 318 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 DEFB125Q8N687 156 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 CRIM1Q9NZV1 1036 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 ABCA1O95477 2261 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 HPNP05981 417 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 C3orf79P0CE67 100 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 SRSF1Q07955 248 aaKnown RBP eCLIP9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 PIGYQ3MUY2 71 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 TMEM116Q8NCL8 245 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 C20orf78Q9BR46 151 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 MRPL27Q9P0M9 148 aaKnown RBP9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 PRR14LQ5THK1 2151 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 IGHV3OR15-7A0A075B7D8 119 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 KBTBD11-OT1A0A1B0GTJ5 212 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 TPRX1Q8N7U7 411 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 SPRR3Q9UBC9 169 aa9.07□□□□□ -0.96
PCDHGA1-201ENST00000378105 ADRA2CP18825 462 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 IL3RAP26951 378 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 ACSF3Q4G176 576 aaPredicted RBP9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 LINC00114Q6XXX2 140 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 NEGR1Q7Z3B1 354 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 PLPPR1Q8TBJ4 325 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 GLMPQ8WWB7 406 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 DDB2Q92466 427 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 WDYHV1Q96HA8 205 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 CDC42EP3Q9UKI2 254 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 GGTLC2Q14390 218 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 SP6Q3SY56 376 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 SNRNP40Q96DI7 357 aaKnown RBP9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 CYYR1Q96J86 154 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 MPC1Q9Y5U8 109 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
PCDHGA1-201ENST00000378105 IFNA1P01562 189 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms