RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TFF1P04155 84 aa12.9□□□□□ -0.34
CSNK1A1-202ENST00000377843 PCOLCEQ15113 449 aa12.9□□□□□ -0.34
CSNK1A1-202ENST00000377843 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
CSNK1A1-202ENST00000377843 SAP30LQ9HAJ7 183 aa12.9□□□□□ -0.34
CSNK1A1-202ENST00000377843 IGHV3-43A0A0B4J1X8 118 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 VWC2LB2RUY7 222 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 SYS1-DBNDD2H3BUS1 97 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 IGHV3-43DP0DP04 118 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 UFSP1Q6NVU6 142 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 ZNF355PQ9NSJ1 428 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 FREM1Q5H8C1 2179 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 ANKRD30BLA7E2S9 258 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 J3QT63 122 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 HBZP02008 142 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 P04436 131 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 RFPL3SP0C7P2 107 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 IGFBP2P18065 325 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 GALMQ96C23 342 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 TAAR6Q96RI8 345 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 JMJD8Q96S16 334 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 PKIBQ9C010 78 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 PEF1Q9UBV8 284 aaKnown RBP12.89□□□□□ -0.35
CSNK1A1-202ENST00000377843 FAM231BA6NCW3 169 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRSS47A8MTI9 375 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 DEFB108AA8MXU0 73 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 PPOXP50336 477 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 PAX2Q02962 417 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 FAM216AQ8WUB2 273 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 MBD6Q96DN6 1003 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 GCM1Q9NP62 436 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 C7orf71A4D174 169 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 DNPH1O43598 174 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 LGALS7P47929 136 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 CAMPP49913 170 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 MRPL49Q13405 166 aaKnown RBP12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 NPVFQ9HCQ7 196 aa12.88□□□□□ -0.35
CSNK1A1-202ENST00000377843 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 GJE1A6NN92 205 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 PROP1O75360 226 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRR20EP86478 221 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRR20CP86479 221 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRR20DP86480 221 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRR20BP86481 221 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRR20AP86496 221 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 GABRA6Q16445 453 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 WDR54Q9H977 334 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 GAGE10A6NGK3 116 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 SNAI2O43623 268 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 OR7C2O60412 319 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 AESQ08117 197 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 FOXF2Q12947 444 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 VWA1Q6PCB0 445 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 C2orf91Q6ZV80 131 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 HSD17B10Q99714 261 aaKnown RBP12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 NAA38Q9BRA0 125 aaKnown RBP12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 NBEAQ8NFP9 2946 aa12.87□□□□□ -0.35
CSNK1A1-202ENST00000377843 OR2J3O76001 311 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 NXPH1P58417 271 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 LPAL2Q16609 132 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 WIPI1Q5MNZ9 446 aaPredicted RBP12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRAMEF5Q5TYX0 476 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 Q6ZR03 302 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 PMCHL2Q9BQD1 86 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 CHRDL1Q9BU40 450 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 C1RLQ9NZP8 487 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 PSG11Q9UQ72 335 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 MPC1Q9Y5U8 109 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 PPIAL4DF5H284 164 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 FCGR3BO75015 233 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 FOXA3P55318 350 aaPredicted RBP12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 TPRX1Q8N7U7 411 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 C5orf17Q8NAS9 161 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 TECTAO75443 2155 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 KMT2EQ8IZD2 1858 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 PI4KAP42356 2102 aa12.86□□□□□ -0.35
CSNK1A1-202ENST00000377843 RFESDQ8TAC1 157 aa12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 SNRNP40Q96DI7 357 aaKnown RBP12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 SP1P08047 785 aa12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 CD46P15529 392 aa12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 HIST1H1AQ02539 215 aaPredicted RBP12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 TCF24Q7RTU0 167 aa12.85□□□□□ -0.35
CSNK1A1-202ENST00000377843 MOB3BQ86TA1 216 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms