RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 C3AR1Q16581 482 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 FA2HQ7L5A8 372 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 VSTM2AQ8TAG5 236 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 TSKUQ8WUA8 353 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.35
FXN-201ENST00000377270 MS4A5Q9H3V2 200 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.35
FXN-201ENST00000377270 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 H3BRM9 83 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 LRRC75BQ2VPJ9 315 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ADAMTSL5Q6ZMM2 481 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ZNF611Q8N823 705 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 SCCPDHQ8NBX0 429 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ANAPC13Q9BS18 74 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 IL36GQ9NZH8 169 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 GNG4P50150 75 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 SEC11AP67812 179 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ZNF90Q03938 601 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 MALLQ13021 153 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 OR10J3Q5JRS4 329 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 EBLN2Q6P2I7 272 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ZNF295-AS1Q8N0V1 137 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 MBD6Q96DN6 1003 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 RAB40CQ96S21 281 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 PKIBQ9C010 78 aa12.89□□□□□ -0.35
FXN-201ENST00000377270 ZNF503-AS2A6NEH8 195 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 SLC17A3O00476 420 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 SP1P08047 785 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 GATAD1Q8WUU5 269 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 CRIM1Q9NZV1 1036 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 VPREB3Q9UKI3 123 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 hDV102S1A0JD36 115 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 PDCD6O75340 191 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 OR7C1O76099 320 aaPredicted RBP12.88□□□□□ -0.35
FXN-201ENST00000377270 GPR183P32249 361 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 MEOX1P50221 254 aa12.88□□□□□ -0.35
FXN-201ENST00000377270 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
FXN-201ENST00000377270 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
FXN-201ENST00000377270 CA1P00915 261 aaPredicted RBP12.87□□□□□ -0.35
FXN-201ENST00000377270 SPINK8P0C7L1 97 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 TBR1Q16650 682 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 ZNF818PQ6ZRF7 136 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 SPAG8Q99932 426 aaPredicted RBP12.87□□□□□ -0.35
FXN-201ENST00000377270 ZNF442Q9H7R0 627 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 ERRFI1Q9UJM3 462 aaPredicted RBP12.87□□□□□ -0.35
FXN-201ENST00000377270 RALYQ9UKM9 306 aaKnown RBP12.87□□□□□ -0.35
FXN-201ENST00000377270 VWC2LB2RUY7 222 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 ISLRO14498 428 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 HTR1DP28221 377 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 C8orf86Q6ZUL3 223 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 GAPTQ8N292 157 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 GPHA2Q96T91 129 aa12.87□□□□□ -0.35
FXN-201ENST00000377270 UBE2G1P62253 170 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 ARL16Q0P5N6 197 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 RNPS1Q15287 305 aaKnown RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 Q6ZPA2 131 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 TRAV38-1A0A0B4J264 116 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 A0A1W2PPM0 123 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 FAM181BA6NEQ2 426 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 HELTA6NFD8 242 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 HMGB3O15347 200 aaKnown RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 HBZP02008 142 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 ZNF114Q8NC26 417 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 OR8B3Q8NGG8 313 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 OR5D13Q8NGL4 314 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 OR8B2Q96RD0 313 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 C1QTNF4Q9BXJ3 329 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 NGBQ9NPG2 151 aa12.86□□□□□ -0.35
FXN-201ENST00000377270 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
FXN-201ENST00000377270 OR4C46A6NHA9 309 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 NGFP01138 241 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 HBG1P69891 147 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 HBG2P69892 147 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 C5orf47Q569G3 176 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 TMEM211Q6ICI0 200 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 APOBEC3DQ96AK3 386 aaPredicted RBP12.85□□□□□ -0.35
FXN-201ENST00000377270 DEFB127Q9H1M4 99 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 PPDPFQ9H3Y8 114 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 MDFIC2A0A1B0GVS7 189 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 HLA-DRB1P01911 266 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
FXN-201ENST00000377270 BCL3P20749 454 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 NPPCP23582 126 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 CRYBB3P26998 211 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 PLA2G5P39877 138 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 FOXE3Q13461 319 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 RAB37Q96AX2 223 aa12.85□□□□□ -0.35
FXN-201ENST00000377270 FGF23Q9GZV9 251 aaPredicted RBP12.85□□□□□ -0.35
FXN-201ENST00000377270 ARHGAP21Q5T5U3 1957 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms