RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 H7C1H1 209 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 IL18BPO95998 194 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 NMBP08949 121 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 STAG3L2P0CL84 134 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 OR4D5Q8NGN0 318 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 OTX1P32242 354 aaPredicted RBP11.39□□□□□ -0.59
GPC6-201ENST00000377047 UQCRFS1P47985 274 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 MORN2Q502X0 79 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 MUC21A0A0G2JKD1 596 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 MUC21A0A140T8X8 626 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 SHISA3A0PJX4 238 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
GPC6-201ENST00000377047 EFNA4P52798 201 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 MUC21Q5SSG8 566 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 ZNF497Q6ZNH5 498 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 GGNQ86UU5 652 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 PSMG3Q9BT73 122 aaPredicted RBP11.39□□□□□ -0.59
GPC6-201ENST00000377047 PLSCR4Q9NRQ2 329 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 RPRMQ9NS64 109 aa11.39□□□□□ -0.59
GPC6-201ENST00000377047 TIMM23O14925 209 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 A0A0G2JNJ9 132 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 WNT2P09544 360 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 Q9UFV3 132 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 UPK2O00526 184 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 UCP1P25874 307 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 COX6CP09669 75 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 FOXG1P55316 489 aaPredicted RBP11.38□□□□□ -0.59
GPC6-201ENST00000377047 RTBDNQ9BSG5 229 aaPredicted RBP11.38□□□□□ -0.59
GPC6-201ENST00000377047 SBF1O95248 1867 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 RHOGP84095 191 aa11.38□□□□□ -0.59
GPC6-201ENST00000377047 IGFBP3P17936 291 aaPredicted RBP11.37□□□□□ -0.59
GPC6-201ENST00000377047 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 OR10AG1Q8NH19 301 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 GGCTO75223 188 aaKnown RBP11.37□□□□□ -0.59
GPC6-201ENST00000377047 HIST1H4GQ99525 98 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 C20orf204Q6ZNR8 217 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 GTSCR1Q86UQ5 136 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 TRBV6-7A0A0A0MS04 114 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
GPC6-201ENST00000377047 CACNA1IQ9P0X4 2223 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 PEX7O00628 323 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 CA7P43166 264 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 Q5BKY6 102 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 GPX4P36969 197 aaPredicted RBP11.36□□□□□ -0.59
GPC6-201ENST00000377047 SPATA45Q537H7 98 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 DOCK4Q8N1I0 1966 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 HBBP68871 147 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 COL25A1Q9BXS0 654 aaPredicted RBP11.36□□□□□ -0.59
GPC6-201ENST00000377047 ZP1P60852 638 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 PAPPA-AS1Q5QFB9 102 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 CACNG8Q8WXS5 425 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 PET117Q6UWS5 81 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 RCC1LQ96I51 464 aaKnown RBP11.36□□□□□ -0.59
GPC6-201ENST00000377047 Q9H3A6 140 aa11.36□□□□□ -0.59
GPC6-201ENST00000377047 TRAV14DV4A0A0A6YYC5 116 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 C17orf82Q86X59 251 aaPredicted RBP11.35□□□□□ -0.59
GPC6-201ENST00000377047 ST6GALNAC3Q8NDV1 305 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 SLC25A28Q96A46 364 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 LYPD3O95274 346 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 KLRD1Q13241 179 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 TMEM219Q86XT9 240 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 GRIFINA4D1Z8 144 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 RAMP3O60896 148 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 FAM71F2Q6NXP2 309 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 DOCK6Q96HP0 2047 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 IGKV1D-13A0A0B4J2D9 117 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 EFNA2O43921 213 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 IGKV1-13P0DP09 117 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 PAX1P15863 534 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 C3orf36Q3SXR2 165 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 PUSL1Q8N0Z8 303 aaKnown RBP11.35□□□□□ -0.59
GPC6-201ENST00000377047 OR11H4Q8NGC9 324 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 MSRB2Q9Y3D2 182 aa11.35□□□□□ -0.59
GPC6-201ENST00000377047 IGKV1-9A0A0C4DH69 117 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
GPC6-201ENST00000377047 LINC00271P0C7V0 271 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 SRD5A1P18405 259 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 SAMD13Q5VXD3 122 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 F11RQ9Y624 299 aaKnown RBP11.34□□□□□ -0.59
GPC6-201ENST00000377047 ZNF319Q9P2F9 582 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 REC114Q7Z4M0 266 aa11.34□□□□□ -0.59
GPC6-201ENST00000377047 PAQR4Q8N4S7 273 aaPredicted RBP11.34□□□□□ -0.59
GPC6-201ENST00000377047 CBY1Q9Y3M2 126 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms