RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DCHS2Q6V1P9 2916 aa16.39■□□□□ 0.22
VSX1-202ENST00000376709 ABCA4P78363 2273 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 RNASE2P10153 161 aaKnown RBP16.39■□□□□ 0.21
VSX1-202ENST00000376709 ATP5G3P48201 142 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 RND2P52198 227 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 ERHP84090 104 aaKnown RBP16.39■□□□□ 0.21
VSX1-202ENST00000376709 MOB3BQ86TA1 216 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 C11orf42Q8N5U0 333 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 OR51G1Q8NGK1 321 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 OR4A5Q8NH83 315 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 PCGF1Q9BSM1 259 aa16.39■□□□□ 0.21
VSX1-202ENST00000376709 SEPSECSQ9HD40 501 aaKnown RBP16.39■□□□□ 0.21
VSX1-202ENST00000376709 NANPQ8TBE9 248 aa16.38■□□□□ 0.21
VSX1-202ENST00000376709 TMEM167AQ8TBQ9 72 aa16.38■□□□□ 0.21
VSX1-202ENST00000376709 MC5RP33032 325 aa16.38■□□□□ 0.21
VSX1-202ENST00000376709 TMEM144Q7Z5S9 345 aa16.38■□□□□ 0.21
VSX1-202ENST00000376709 PRR20EP86478 221 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 PRR20CP86479 221 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 PRR20DP86480 221 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 PRR20BP86481 221 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 PRR20AP86496 221 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 FAM210BQ96KR6 192 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 HRNRQ86YZ3 2850 aaPredicted RBP16.37■□□□□ 0.21
VSX1-202ENST00000376709 A0A1W2PN81 502 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 ENSAO43768 121 aaKnown RBP16.37■□□□□ 0.21
VSX1-202ENST00000376709 CHRNA7P36544 502 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 GAMTQ14353 236 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 C16orf82Q7Z2V1 217 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 CACNA1AO00555 2505 aa16.37■□□□□ 0.21
VSX1-202ENST00000376709 E7EUB6 86 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 IGLV2-23P01705 113 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 IGHV2-70P01814 119 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 NPPCP23582 126 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 PPOXP50336 477 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 VMA21Q3ZAQ7 101 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 SPATA31B1PQ5VZV4 182 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 ZNF430Q9H8G1 570 aaPredicted RBP16.36■□□□□ 0.21
VSX1-202ENST00000376709 MALRD1Q5VYJ5 2156 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 IGHV2-26A0A0B4J1V2 119 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 F6UZH7 168 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 SLC25A17O43808 307 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 S100A8P05109 93 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 DLX1P56177 255 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 ZNF841Q6ZN19 808 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 SLC16A13Q7RTY0 426 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 TNFRSF14Q92956 283 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 TXNDC17Q9BRA2 123 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 SLC45A2Q9UMX9 530 aa16.36■□□□□ 0.21
VSX1-202ENST00000376709 IGKV1OR2-108A0A075B7D4 117 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 IGHV3-72A0A0B4J1Y9 119 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 ACTL6BO94805 426 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 NDUFB4O95168 129 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 VENTXO95231 258 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 MT-CO2P00403 227 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 TRGC2P03986 189 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 GCHFRP30047 84 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 PRRX1P54821 245 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 GNB1P62873 340 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 CD69Q07108 199 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 MLANAQ16655 118 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 C10orf55Q5SWW7 151 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 FAM78BQ5VT40 261 aa16.35■□□□□ 0.21
VSX1-202ENST00000376709 H7BYZ3 331 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 TACC2O95359 2948 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 FSTL3O95633 263 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 LINC00869P0C866 280 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 PRB3Q04118 309 aaPredicted RBP16.34■□□□□ 0.21
VSX1-202ENST00000376709 HLA-DRB5Q30154 266 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 OR4P4Q8NGL7 312 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 PPIAL4CA0A0B4J2A2 164 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 PPIAL4GP0DN37 164 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 SFTPCP11686 197 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 OR10J1P30954 320 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 NECAP1Q8NC96 275 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 OR5T1Q8NG75 326 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 TMEM204Q9BSN7 226 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 RAB1BQ9H0U4 201 aa16.34■□□□□ 0.21
VSX1-202ENST00000376709 INS-IGF2F8WCM5 200 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 CLN5O75503 358 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 SMIM6P0DI80 62 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 LGALS7P47929 136 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 WT1-ASQ06250 92 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 RITA1Q96K30 269 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 SLC35E1Q96K37 410 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 DERL1Q9BUN8 251 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 TRBV24-1A0A075B6N3 115 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BKO60814 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BJP06899 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BOP23527 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 GATA2P23769 480 aaPredicted RBP16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BBP33778 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 NDUFA6P56556 154 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BDP58876 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BCP62807 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST2H2BEQ16778 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.33■□□□□ 0.2
VSX1-202ENST00000376709 OR8B3Q8NGG8 313 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 CACNG8Q8WXS5 425 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 HIST1H2BHQ93079 126 aa16.33■□□□□ 0.2
VSX1-202ENST00000376709 OR5B12Q96R08 314 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms