RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TGFAP01135 160 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-204ENST00000376634 H0YL77 283 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 KIAA1644Q3SXP7 199 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 FAM71F2Q6NXP2 309 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 LINC01587Q99440 93 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 DANCRP0C864 163 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 ZNF729A6NN14 1252 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-204ENST00000376634 TCF19Q9Y242 345 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 A0A1W2PPV9 198 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 NDUFS8O00217 210 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 RFLNBQ8N5W9 214 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 C14orf144Q96I85 54 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
VPS13A-204ENST00000376634 TMEM252Q8N6L7 170 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 C5orf66Q9H5L9 145 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 APOMO95445 188 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 PEAR1Q5VY43 1037 aaPredicted RBP10.64□□□□□ -0.71
VPS13A-204ENST00000376634 VGLL1Q99990 258 aa10.64□□□□□ -0.71
VPS13A-204ENST00000376634 PATE3B3GLJ2 98 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 IGKV1D-16P01601 117 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 SAA1P0DJI8 122 aaPredicted RBP10.63□□□□□ -0.71
VPS13A-204ENST00000376634 RNF182Q8N6D2 247 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 ELOVL5Q9NYP7 299 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 JPT1Q9UK76 154 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 PLA2G10O15496 165 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 CELA2AP08217 269 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 A0A1W2PP11 408 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 HTN3P15516 51 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 GCHFRP30047 84 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 PEBP1P30086 187 aaKnown RBP10.63□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3OR16-10A0A075B7F0 116 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 A0A0J9YW62 118 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 PRR19A6NJB7 356 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 TMEM91Q6ZNR0 172 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 ST6GALNAC3Q8NDV1 305 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
VPS13A-204ENST00000376634 PTP4A3O75365 173 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 IL11P20809 199 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 ARPC1AQ92747 370 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 SSBP3Q9BWW4 388 aaPredicted RBP10.63□□□□□ -0.71
VPS13A-204ENST00000376634 NPCDR1Q9BY65 106 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 DLL3Q9NYJ7 618 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 ZG16O60844 167 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 Q6AWC8 147 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 LHFPL6Q9Y693 200 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 LTBP4Q8N2S1 1624 aa10.63□□□□□ -0.71
VPS13A-204ENST00000376634 WDR87Q6ZQQ6 2873 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 LEPP41159 167 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3-49A0A0A0MS15 119 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 OR11H4Q8NGC9 324 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 LOXL4Q96JB6 756 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 TRAV8-4A0A0B4J246 113 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3-66A0A0C4DH42 116 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.62□□□□□ -0.71
VPS13A-204ENST00000376634 SLC17A3O00476 420 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 PGPEP1LA6NFU8 196 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 NUP210Q8TEM1 1887 aaPredicted RBP10.62□□□□□ -0.71
VPS13A-204ENST00000376634 ICAM4Q14773 271 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 CYB5R2Q6BCY4 276 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 ZNF818PQ6ZRF7 136 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 TTC9CQ8N5M4 171 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 G6PC2Q9NQR9 355 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 NMBP08949 121 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 C1QAP02745 245 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 FAM168AQ92567 244 aa10.62□□□□□ -0.71
VPS13A-204ENST00000376634 VENTXO95231 258 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 DTX2Q86UW9 622 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 RIPPLY2Q5TAB7 128 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 OR4X2Q8NGF9 303 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 Q96M66 194 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 NABP2Q9BQ15 211 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
VPS13A-204ENST00000376634 LIMS2Q7Z4I7 341 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 CIARTQ8N365 385 aaPredicted RBP10.61□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3OR16-13A0A075B7E8 117 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3-74A0A0B4J1X5 117 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 P2RY4P51582 365 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 PEMTQ9UBM1 199 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 TNS1Q9HBL0 1735 aaKnown RBP10.61□□□□□ -0.71
VPS13A-204ENST00000376634 GGTLC3B5MD39 225 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 TM4SF5O14894 197 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 PLNP26678 52 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 TMEM106BQ9NUM4 274 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 TRAV24A0A0B4J272 114 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 RND3P61587 244 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 ZNF660Q6AZW8 331 aaPredicted RBP10.61□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3-23P01764 117 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 C1orf53Q5VUE5 145 aa10.61□□□□□ -0.71
VPS13A-204ENST00000376634 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
VPS13A-204ENST00000376634 IGHV3-35A0A0C4DH35 117 aa10.6□□□□□ -0.71
VPS13A-204ENST00000376634 APOHP02749 345 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms