RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 SCARB1Q8WTV0 552 aa13.74□□□□□ -0.21
HDAC6-202ENST00000376610 TSC22D3Q99576 134 aa13.74□□□□□ -0.21
HDAC6-202ENST00000376610 K7EMT4 169 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 GPR31O00270 319 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 PMP2P02689 132 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 G6PCP35575 357 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 OR6F1Q8NGZ6 308 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 OR5B3Q8NH48 314 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 FCAMRQ8WWV6 532 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 CHRDL1Q9BU40 450 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 NSG2Q9Y328 171 aa13.73□□□□□ -0.21
HDAC6-202ENST00000376610 KLK5Q9Y337 293 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-202ENST00000376610 RELQ04864 619 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-202ENST00000376610 ODF3L2Q3SX64 289 aa13.72□□□□□ -0.21
HDAC6-202ENST00000376610 SAMD12Q8N8I0 201 aa13.72□□□□□ -0.21
HDAC6-202ENST00000376610 GALNT14Q96FL9 552 aa13.72□□□□□ -0.21
HDAC6-202ENST00000376610 IGHV3OR16-8A0A075B7F1 116 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 C15orf62A8K5M9 175 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 NUPL2O15504 423 aaKnown RBP13.71□□□□□ -0.21
HDAC6-202ENST00000376610 ZNF207O43670 478 aaKnown RBP13.71□□□□□ -0.21
HDAC6-202ENST00000376610 RPL35AP18077 110 aaKnown RBP13.71□□□□□ -0.21
HDAC6-202ENST00000376610 ATF4P18848 351 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-202ENST00000376610 PRSS3P35030 304 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 MFAP2P55001 183 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 TAS2R20P59543 309 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 LPCAT3Q6P1A2 487 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 CEMP1Q6PRD7 247 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-202ENST00000376610 RNF183Q96D59 192 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
HDAC6-202ENST00000376610 K7EIM0 57 aa13.7□□□□□ -0.22
HDAC6-202ENST00000376610 YIF1AO95070 293 aa13.7□□□□□ -0.22
HDAC6-202ENST00000376610 CTSDP07339 412 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-202ENST00000376610 ADMP35318 185 aa13.7□□□□□ -0.22
HDAC6-202ENST00000376610 CMC4P56277 68 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-202ENST00000376610 OR1P1Q8NH06 330 aa13.7□□□□□ -0.22
HDAC6-202ENST00000376610 CMTM3Q96MX0 182 aa13.7□□□□□ -0.22
HDAC6-202ENST00000376610 FXYD6Q9H0Q3 95 aa13.7□□□□□ -0.22
HDAC6-202ENST00000376610 C15orf61A6NNL5 157 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 NAT1P18440 290 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 TSPAN5P62079 268 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 KCTD21Q4G0X4 260 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 OR4A16Q8NH70 328 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 SMPXQ9UHP9 88 aa13.69□□□□□ -0.22
HDAC6-202ENST00000376610 IGHV7-4-1A0A0J9YVY3 117 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 F8W735 103 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-202ENST00000376610 CTSGP08311 255 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 HLA-DMAP28067 261 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 HRH1P35367 487 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 MFAP4P55083 255 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 PHLDA2Q53GA4 152 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 H2BFWTQ7Z2G1 175 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 SLC25A46Q96AG3 418 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 TXN2Q99757 166 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 RHPN1-AS1Q9BWJ2 59 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 MAP6D1Q9H9H5 199 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
HDAC6-202ENST00000376610 FAM212BQ9NTI7 297 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-202ENST00000376610 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
HDAC6-202ENST00000376610 RPS19P39019 145 aaKnown RBP13.67□□□□□ -0.22
HDAC6-202ENST00000376610 EWSR1Q01844 656 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDAC6-202ENST00000376610 RNF2Q99496 336 aa13.67□□□□□ -0.22
HDAC6-202ENST00000376610 TRAV14DV4A0A0A6YYC5 116 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 CHEK1O14757 476 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
HDAC6-202ENST00000376610 FCGR2BP31994 310 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-202ENST00000376610 TGFBR1P36897 503 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 TFPI2P48307 235 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 TBC1D26Q86UD7 250 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 APRG1Q8IVJ8 170 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 GINS3Q9BRX5 216 aa13.66□□□□□ -0.22
HDAC6-202ENST00000376610 IGKV3-7A0A075B6H7 116 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 DBX1A6NMT0 343 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 MPTX1A8MV57 137 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 GNG7O60262 68 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 CD5P06127 495 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 LSM3P62310 102 aaKnown RBP13.65□□□□□ -0.22
HDAC6-202ENST00000376610 ERHP84090 104 aaKnown RBP13.65□□□□□ -0.22
HDAC6-202ENST00000376610 ZNF114Q8NC26 417 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 GATAD1Q8WUU5 269 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 PINX1Q96BK5 328 aaKnown RBP13.65□□□□□ -0.22
HDAC6-202ENST00000376610 OR10C1Q96KK4 312 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
HDAC6-202ENST00000376610 IGHV3-49A0A0A0MS15 119 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 I3L2K1 104 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 MT-CO2P00403 227 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 PRCDQ00LT1 54 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 LYSMD2Q8IV50 215 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 GPX8Q8TED1 209 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 SEC22AQ96IW7 307 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 NXF2Q9GZY0 626 aaKnown RBP13.64□□□□□ -0.23
HDAC6-202ENST00000376610 SCPEP1Q9HB40 452 aa13.64□□□□□ -0.23
HDAC6-202ENST00000376610 HSPE1P61604 102 aaKnown RBP13.63□□□□□ -0.23
HDAC6-202ENST00000376610 PHLDA1Q8WV24 401 aaPredicted RBP13.63□□□□□ -0.23
HDAC6-202ENST00000376610 MRGPRFQ96AM1 343 aa13.63□□□□□ -0.23
HDAC6-202ENST00000376610 RARRES2Q99969 163 aa13.63□□□□□ -0.23
HDAC6-202ENST00000376610 COMMD3Q9UBI1 195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms