RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
MDC1-201ENST00000376406 TRBV6-7A0A0A0MS04 114 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 GPR82Q96P67 336 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 PLSCR4Q9NRQ2 329 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 CLPSP04118 112 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 GATA3P23771 443 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 CKS2P33552 79 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 LY6G6FQ5SQ64 297 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 ZNF497Q6ZNH5 498 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 A0A0A6YYD4 124 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 CA7P43166 264 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 AKIRIN1Q9H9L7 192 aaPredicted RBP9.23□□□□□ -0.93
MDC1-201ENST00000376406 FBLL1A6NHQ2 334 aaKnown RBP9.23□□□□□ -0.93
MDC1-201ENST00000376406 VDAC2P45880 294 aaPredicted RBP9.23□□□□□ -0.93
MDC1-201ENST00000376406 PSMB2P49721 201 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 LINC00305Q7Z4B0 112 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 RPRMQ9NS64 109 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 CENPWQ5EE01 88 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 A0A087WV48 116 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 KBTBD11-OT1A0A1B0GTJ5 212 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.23□□□□□ -0.93
MDC1-201ENST00000376406 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
MDC1-201ENST00000376406 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
MDC1-201ENST00000376406 GTF3AQ92664 365 aaKnown RBP9.23□□□□□ -0.93
MDC1-201ENST00000376406 OR4C46A6NHA9 309 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 NDUFS8O00217 210 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 CD5P06127 495 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 TFF3Q07654 80 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 Q6ZS92 163 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 IGKV1-9A0A0C4DH69 117 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 C17orf98A8MV24 154 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 HTN1P15515 57 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 EFNA4P52798 201 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 LY6EQ16553 131 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 PAQR4Q8N4S7 273 aaPredicted RBP9.22□□□□□ -0.93
MDC1-201ENST00000376406 FAM169BQ8N8A8 192 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 PROB1E7EW31 1015 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 MOSP00540 346 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 TRGV3P03979 118 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 LCN2P80188 198 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 MBNL2Q5VZF2 373 aaKnown RBP9.22□□□□□ -0.93
MDC1-201ENST00000376406 C3orf36Q3SXR2 165 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 WBP1Q96G27 269 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 PSG7Q13046 419 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 COL25A1Q9BXS0 654 aaPredicted RBP9.22□□□□□ -0.93
MDC1-201ENST00000376406 UQCR10Q9UDW1 63 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 CIDEAO60543 219 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 SLC25A16P16260 332 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 OR13A1Q8NGR1 328 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
MDC1-201ENST00000376406 OOSP1A8MZH6 123 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 FOLR2P14207 255 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 DDTP30046 118 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 SSC4DQ8WTU2 575 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 LEPROTL1O95214 131 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 PPP1R17O96001 155 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 SRIP30626 198 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 RNASEH2CQ8TDP1 164 aaKnown RBP9.21□□□□□ -0.93
MDC1-201ENST00000376406 SPRR3Q9UBC9 169 aa9.21□□□□□ -0.93
MDC1-201ENST00000376406 STAG3L2P0CL84 134 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 SRSF9Q13242 221 aaKnown RBP eCLIP9.21□□□□□ -0.94
MDC1-201ENST00000376406 IFI27L2Q9H2X8 130 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 TRAV9-1A0A075B6T8 112 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 LOC105371267A0A1B0GV96 52 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 NMUP48645 174 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 FAM166AQ6J272 317 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 CELA3BP08861 270 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 SNRPCP09234 159 aaKnown RBP9.21□□□□□ -0.94
MDC1-201ENST00000376406 ZNF841Q6ZN19 808 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 IL36BQ9NZH7 164 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 BTF3P20290 206 aaKnown RBP9.21□□□□□ -0.94
MDC1-201ENST00000376406 ZNF525Q8N782 197 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 NPIPB3Q92617 1050 aa9.21□□□□□ -0.94
MDC1-201ENST00000376406 EAF1Q96JC9 268 aaPredicted RBP9.21□□□□□ -0.94
MDC1-201ENST00000376406 C5orf52A6NGY3 159 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 GPX4P36969 197 aaPredicted RBP9.2□□□□□ -0.94
MDC1-201ENST00000376406 FMC1Q96HJ9 113 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 MST1P26927 711 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 ARPC1AQ92747 370 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 ANOS1P23352 680 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 PHLDA3Q9Y5J5 127 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 COL4A6Q14031 1691 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 B4DSR2 109 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 HBBP68871 147 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 MINOS1Q5TGZ0 78 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 OR10S1Q8NGN2 331 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 MINOS1-NBL1R4GNA1 71 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 FAM90A9PA6NNJ1 464 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 YPEL1O60688 119 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 SRSF12Q8WXF0 261 aaKnown RBP9.2□□□□□ -0.94
MDC1-201ENST00000376406 YPEL2Q96QA6 119 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 DLX1P56177 255 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 PLPPR1Q8TBJ4 325 aa9.2□□□□□ -0.94
MDC1-201ENST00000376406 CRYGSP22914 178 aa9.19□□□□□ -0.94
MDC1-201ENST00000376406 ZNF324BQ6AW86 544 aaPredicted RBP9.19□□□□□ -0.94
MDC1-201ENST00000376406 C12orf54Q6X4T0 127 aa9.19□□□□□ -0.94
MDC1-201ENST00000376406 CACNG8Q8WXS5 425 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms