RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 FKBP11Q9NYL4 201 aa12.22□□□□□ -0.45
C11orf88-202ENST00000375618 F11RQ9Y624 299 aaKnown RBP12.22□□□□□ -0.45
C11orf88-202ENST00000375618 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
C11orf88-202ENST00000375618 K7EIL1 84 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 PLA2G10O15496 165 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 HIST1H1BP16401 226 aaKnown RBP12.21□□□□□ -0.45
C11orf88-202ENST00000375618 ZP3P21754 424 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 HAPLN4Q86UW8 402 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 ZNF429Q86V71 674 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 OR2C3Q8N628 320 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 SLC35G3Q8N808 338 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 SCGB3A2Q96PL1 93 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 FLVCR2Q9UPI3 526 aa12.21□□□□□ -0.45
C11orf88-202ENST00000375618 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.45
C11orf88-202ENST00000375618 IGHV3-21A0A0B4J1V1 117 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 DHFRP00374 187 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 MECP2P51608 486 aaKnown RBP12.2□□□□□ -0.46
C11orf88-202ENST00000375618 AARDQ4LEZ3 155 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 C11orf87Q6NUJ2 197 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 CLEC19AQ6UXS0 136 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 HSD17B13Q7Z5P4 300 aaPredicted RBP12.2□□□□□ -0.46
C11orf88-202ENST00000375618 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 RRNAD1Q96FB5 475 aaKnown RBP12.2□□□□□ -0.46
C11orf88-202ENST00000375618 SLC25A21Q9BQT8 299 aaPredicted RBP12.2□□□□□ -0.46
C11orf88-202ENST00000375618 GPR61Q9BZJ8 451 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
C11orf88-202ENST00000375618 K7EIM0 57 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 ATG12O94817 140 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 NDUFB6O95139 128 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 EDN2P20800 178 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 INPP1P49441 399 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 PPP1R1AQ13522 171 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 ANKRD55Q3KP44 614 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 LYZL2Q7Z4W2 148 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 ZC4H2Q9NQZ6 224 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 KCNIP3Q9Y2W7 256 aa12.19□□□□□ -0.46
C11orf88-202ENST00000375618 F8W735 103 aaPredicted RBP12.18□□□□□ -0.46
C11orf88-202ENST00000375618 SAP30O75446 220 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 OR2C1O95371 312 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
C11orf88-202ENST00000375618 RPEL1Q2QD12 228 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 ADAMTSL5Q6ZMM2 481 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 FAM219AQ8IW50 185 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
C11orf88-202ENST00000375618 IL22RA2Q969J5 263 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 EEF1AKMT3Q96AZ1 226 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 ZNF414Q96IQ9 312 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 PLEKHA3Q9HB20 300 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 PTTG2Q9NZH5 202 aa12.18□□□□□ -0.46
C11orf88-202ENST00000375618 NAP1L6A6NFF2 107 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 INS-IGF2F8WCM5 200 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 NXPH3O95157 252 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 IFNA17P01571 189 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 CLEC3BP05452 202 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 ARL3P36405 182 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 CENPSQ8N2Z9 138 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 ZNF114Q8NC26 417 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 OR9G4Q8NGQ1 327 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 OR1P1Q8NH06 330 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 SCARB1Q8WTV0 552 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 PRR25Q96S07 402 aa12.17□□□□□ -0.46
C11orf88-202ENST00000375618 TRBV7-1A0A0A6YYK4 115 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 I3L2K1 104 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 SFT2D2O95562 160 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 IGHV3-48P01763 117 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 CSN3P07498 182 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
C11orf88-202ENST00000375618 VAMP1P23763 118 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 GPR183P32249 361 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 LINC00299Q6ZSB3 139 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 REC114Q7Z4M0 266 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 LGI3Q8N145 548 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 MRAPQ8TCY5 172 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 VN1R17PQ8TDU5 208 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.16□□□□□ -0.46
C11orf88-202ENST00000375618 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
C11orf88-202ENST00000375618 GGCTO75223 188 aaKnown RBP12.15□□□□□ -0.46
C11orf88-202ENST00000375618 INSL3P51460 131 aa12.15□□□□□ -0.46
C11orf88-202ENST00000375618 PVRIGQ6DKI7 326 aa12.15□□□□□ -0.46
C11orf88-202ENST00000375618 MISP3Q96FF7 219 aa12.15□□□□□ -0.46
C11orf88-202ENST00000375618 THYN1Q9P016 225 aa12.15□□□□□ -0.46
C11orf88-202ENST00000375618 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 LYRM1O43325 122 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 MT-CO2P00403 227 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 SPNP16150 400 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 ANXA7P20073 488 aaKnown RBP12.14□□□□□ -0.47
C11orf88-202ENST00000375618 ADMP35318 185 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
C11orf88-202ENST00000375618 SPCS3P61009 180 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 ERHP84090 104 aaKnown RBP12.14□□□□□ -0.47
C11orf88-202ENST00000375618 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 UNQ9165/PRO28630Q6UXU0 137 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 LRTM2Q8N967 370 aa12.14□□□□□ -0.47
C11orf88-202ENST00000375618 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms