RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SMIM27A0A1W2PRY6 76 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 IGKV3-15P01624 115 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 IGLV2-8P01709 118 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 FABP6P51161 128 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 Q6ZN92 141 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 STPG4Q8N801 248 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 TECTAO75443 2155 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 IGKV1D-17A0A075B6S4 117 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 MGST3O14880 152 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 RNFT1Q5M7Z0 435 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 PPIAL4AQ9Y536 164 aa17.35■□□□□ 0.37
UPF3A-202ENST00000375299 DPRXA6NFQ7 191 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 GGTLC3B5MD39 225 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 TCF21O43680 179 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 CD46P15529 392 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 C19orf35Q6ZS72 473 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 TSKUQ8WUA8 353 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 IGF2BP2-AS1Q96M15 143 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 PLEKHA3Q9HB20 300 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 LAMTOR2Q9Y2Q5 125 aa17.34■□□□□ 0.37
UPF3A-202ENST00000375299 OR7C2O60412 319 aa17.33■□□□□ 0.37
UPF3A-202ENST00000375299 NDUFB8O95169 186 aa17.33■□□□□ 0.37
UPF3A-202ENST00000375299 Q6ZT83 130 aa17.33■□□□□ 0.37
UPF3A-202ENST00000375299 PPP1R35Q8TAP8 253 aa17.33■□□□□ 0.37
UPF3A-202ENST00000375299 IDI2-AS1Q9NZ38 188 aa17.33■□□□□ 0.37
UPF3A-202ENST00000375299 MYOD1P15172 320 aa17.33■□□□□ 0.36
UPF3A-202ENST00000375299 HOXC12P31275 282 aa17.33■□□□□ 0.36
UPF3A-202ENST00000375299 PPOXP50336 477 aa17.33■□□□□ 0.36
UPF3A-202ENST00000375299 FAM214BQ7L5A3 538 aa17.33■□□□□ 0.36
UPF3A-202ENST00000375299 FAM122AQ96E09 287 aa17.33■□□□□ 0.36
UPF3A-202ENST00000375299 SLC35D1Q9NTN3 355 aa17.33■□□□□ 0.36
UPF3A-202ENST00000375299 IZUMO1RA6ND01 250 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 APCSP02743 223 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 MGST1P10620 155 aaKnown RBP17.32■□□□□ 0.36
UPF3A-202ENST00000375299 FAM19A2Q8N3H0 131 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 KLHDC1Q8N7A1 406 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 BORCS7Q96B45 105 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 HINT2Q9BX68 163 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 SERTAD4Q9NUC0 356 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 CD59P13987 128 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 ZNF439Q8NDP4 499 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 WNT10AQ9GZT5 417 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 GCM1Q9NP62 436 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 CALYQ9NYX4 217 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 OR51B2Q9Y5P1 312 aa17.32■□□□□ 0.36
UPF3A-202ENST00000375299 SRRM5B3KS81 715 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 USF1P22415 310 aaPredicted RBP17.31■□□□□ 0.36
UPF3A-202ENST00000375299 TAS2R45P59539 299 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 RTL8BQ17RB0 113 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 TUBG2Q9NRH3 451 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 A0A1W2PRE2 83 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 ITGB1BP1O14713 200 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 UTF1Q5T230 341 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 LEAP2Q969E1 77 aa17.31■□□□□ 0.36
UPF3A-202ENST00000375299 MRPL27Q9P0M9 148 aaKnown RBP17.31■□□□□ 0.36
UPF3A-202ENST00000375299 CECR9P0C854 216 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 SAA2P0DJI9 122 aaPredicted RBP17.3■□□□□ 0.36
UPF3A-202ENST00000375299 NTF3P20783 257 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 MZT1Q08AG7 82 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 CLCF1Q9UBD9 225 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 IGKV1OR2-108A0A075B7D4 117 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 GATA2P23769 480 aaPredicted RBP17.3■□□□□ 0.36
UPF3A-202ENST00000375299 MOB3BQ86TA1 216 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 C18orf32Q8TCD1 76 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 COMMD5Q9GZQ3 224 aa17.3■□□□□ 0.36
UPF3A-202ENST00000375299 ZNF331Q9NQX6 463 aaPredicted RBP17.3■□□□□ 0.36
UPF3A-202ENST00000375299 IGHV3OR15-7A0A075B7D8 119 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 SLAQ13239 276 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 C21orf62-AS1Q17RA5 79 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 CT45A1Q5HYN5 189 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 MBNL2Q5VZF2 373 aaKnown RBP17.29■□□□□ 0.36
UPF3A-202ENST00000375299 PNKDQ8N490 385 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.29■□□□□ 0.36
UPF3A-202ENST00000375299 CT45A3Q8NHU0 189 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 C19orf24Q9BVV8 132 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 STUMQ69YW2 141 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 ZNRF1Q8ND25 227 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 OR2Z1Q8NG97 314 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 ORAOV1Q8WV07 137 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 FER1L6-AS2Q96M78 137 aa17.29■□□□□ 0.36
UPF3A-202ENST00000375299 J3QR06 171 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 CA1P00915 261 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-202ENST00000375299 SELENOVP59797 346 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 POU2AF1Q16633 256 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 PRNDQ9UKY0 176 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 GPR179Q6PRD1 2367 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 TRAV34A0A0B4J273 112 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 C8orf88P0DMB2 117 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 PRCDQ00LT1 54 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 PMCHL1Q16048 86 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 RASL11AQ6T310 242 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 CNEP1R1Q8N9A8 125 aa17.28■□□□□ 0.36
UPF3A-202ENST00000375299 WIPF2Q8TF74 440 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-202ENST00000375299 C20orf202A1L168 122 aa17.27■□□□□ 0.36
UPF3A-202ENST00000375299 C17orf58Q2M2W7 97 aa17.27■□□□□ 0.36
UPF3A-202ENST00000375299 ATOH7Q8N100 152 aa17.27■□□□□ 0.36
UPF3A-202ENST00000375299 GCSAMQ8N6F7 178 aa17.27■□□□□ 0.36
UPF3A-202ENST00000375299 TRIB1Q96RU8 372 aa17.27■□□□□ 0.36
UPF3A-202ENST00000375299 CLEC7AQ9BXN2 247 aa17.27■□□□□ 0.36
UPF3A-202ENST00000375299 CDX4O14627 284 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms