RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DNM1P46Q6ZS02 220 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 TCF24Q7RTU0 167 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 PRDM13Q9H4Q3 707 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 WDR83OSQ9Y284 106 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 MYO7BQ6PIF6 2116 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 ZNF407Q9C0G0 2248 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 KBTBD11-OT1A0A1B0GTJ5 212 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 PEX7O00628 323 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 NMSQ5H8A3 153 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 ZNF502Q8TBZ5 544 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 DEPPQ9NTK1 212 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 RABAC1Q9UI14 185 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 PRR19A6NJB7 356 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 STAG3L2P0CL84 134 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 TNFSF10P50591 281 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 PLP1P60201 277 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 C17orf82Q86X59 251 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-203ENST00000375274 CACNG8Q8WXS5 425 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 PNRC2Q9NPJ4 139 aaKnown RBP9.68□□□□□ -0.86
PTCH1-203ENST00000375274 A0A1B0GW64 132 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 IGHV1-2P23083 117 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 FAM216BQ8N7L0 139 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 EAF1Q96JC9 268 aaPredicted RBP9.68□□□□□ -0.86
PTCH1-203ENST00000375274 RFNGQ9Y644 331 aa9.68□□□□□ -0.86
PTCH1-203ENST00000375274 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 ATXN7O15265 892 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 RBFOX2O43251 390 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 RPP25LQ8N5L8 163 aaKnown RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM171Q8WVE6 324 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 NRN1Q9NPD7 142 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 COL6A6A6NMZ7 2263 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 PPIAL4CA0A0B4J2A2 164 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 IL4P05112 153 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 PPIAL4GP0DN37 164 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 RPS20P60866 119 aaKnown RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 C1orf162Q8NEQ5 155 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 MIEN1Q9BRT3 115 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 LPAR2Q9HBW0 351 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 ZSWIM8A7E2V4 1837 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 MYLKQ15746 1914 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 IGHV2OR16-5A0A0B4J2B6 119 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 CCL21O00585 134 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 PYY3Q5JQD4 70 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 RBPMS2Q6ZRY4 209 aaKnown RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 OCC1Q8TAD7 63 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 CEACAM1P13688 526 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 HTN1P15515 57 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 ARF6P62330 175 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 GCSAMLQ5JQS6 135 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 CLEC7AQ9BXN2 247 aa9.67□□□□□ -0.86
PTCH1-203ENST00000375274 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
PTCH1-203ENST00000375274 AMBPP02760 352 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 LYL1P12980 280 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 CFPP27918 469 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 ADMP35318 185 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 FOXG1P55316 489 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-203ENST00000375274 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 DOCK10Q96BY6 2186 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 TSC2P49815 1807 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 M0R3E3 92 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 YPEL1O60688 119 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 SRSF7Q16629 238 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 YPEL2Q96QA6 119 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 MED13LQ71F56 2210 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 MGAMO43451 1857 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 CGB1A6NKQ9 187 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 TM4SF5O14894 197 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 NUDT3O95989 172 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 TEX38Q6PEX7 206 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 ST6GALNAC3Q8NDV1 305 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
PTCH1-203ENST00000375274 ANOS1P23352 680 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 C16orf92Q96LL3 132 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 COLQQ9Y215 455 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-203ENST00000375274 A0A1B0GUT8 65 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 ACSF3Q4G176 576 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-203ENST00000375274 UNQ5815/PRO19632Q6UWF5 114 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 ABCA4P78363 2273 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 A6NJY4 79 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 MORN2Q502X0 79 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 WDR82Q6UXN9 313 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 GPR82Q96P67 336 aa9.65□□□□□ -0.86
PTCH1-203ENST00000375274 IGHV3-35A0A0C4DH35 117 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 IZUMO1RA6ND01 250 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 FAM106CPP0CH98 169 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 DUTP33316 252 aaKnown RBP9.65□□□□□ -0.87
PTCH1-203ENST00000375274 PSG9Q00887 426 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 FAM90A1Q86YD7 464 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 OR1N2Q8NGR9 330 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 DPF1Q92782 380 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 UBTD1Q9HAC8 227 aa9.65□□□□□ -0.87
PTCH1-203ENST00000375274 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms