RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FAM19A2Q8N3H0 131 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 FAM216AQ8WUB2 273 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 C11orf52Q96A22 123 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 SFXN3Q9BWM7 321 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 J3QW42 95 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
CCDC40-203ENST00000374877 TIGITQ495A1 244 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 ATOH7Q8N100 152 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 Q8N976 141 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 KCNS1Q96KK3 526 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 CXXC4Q9H2H0 198 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 ENY2Q9NPA8 101 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 RAXQ9Y2V3 346 aa9.13□□□□□ -0.95
CCDC40-203ENST00000374877 A0A1W2PS18 150 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 C15orf65H3BRN8 121 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 OR7C2O60412 319 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 PCP4P48539 62 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 WDR73Q6P4I2 378 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 SLC24A4Q8NFF2 622 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 AGFG2O95081 481 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 MT-ND6P03923 174 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 IGHV1-2P23083 117 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 ZNF83P51522 516 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 CX3CL1P78423 397 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 OR52E5Q8NH55 327 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 ABHD17AQ96GS6 310 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 PLEKHA3Q9HB20 300 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 UQCR10Q9UDW1 63 aa9.12□□□□□ -0.95
CCDC40-203ENST00000374877 WISP2O76076 250 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 AARDQ4LEZ3 155 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 MORN2Q502X0 79 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 CD177Q8N6Q3 437 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 STPG4Q8N801 248 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 LRRC29Q8WV35 223 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 LEAP2Q969E1 77 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 IL19Q9UHD0 177 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 AHRRA9YTQ3 701 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 CA2P00918 260 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 OR10J4P0C629 311 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 MYOD1P15172 320 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 FAM90A9PA6NNJ1 464 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 K7EM74 188 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 HYPMO75409 117 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-203ENST00000374877 OR5G3P0C626 314 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 C3orf79P0CE67 100 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 GATA2P23769 480 aaPredicted RBP9.11□□□□□ -0.95
CCDC40-203ENST00000374877 ASPHD1Q5U4P2 390 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 CLCF1Q9UBD9 225 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 DUSP13Q9UII6 198 aa9.11□□□□□ -0.95
CCDC40-203ENST00000374877 DPRXA6NFQ7 191 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-203ENST00000374877 IGLC2P0DOY2 106 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 PRDX2P32119 198 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 CTRLP40313 264 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 BORCS7Q96B45 105 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 TNCP24821 2201 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 BMPR1BO00238 502 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 AREGP15514 252 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 ZNF134P52741 427 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 IBA57Q5T440 356 aaKnown RBP9.1□□□□□ -0.95
CCDC40-203ENST00000374877 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 NABP2Q9BQ15 211 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 TMEM167BQ9NRX6 74 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 SLC35D1Q9NTN3 355 aa9.1□□□□□ -0.95
CCDC40-203ENST00000374877 C15orf61A6NNL5 157 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 AMY1AP04745 511 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 HOXC12P31275 282 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 LCN12Q6JVE5 192 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 TRAT1Q6PIZ9 186 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 OR4S2Q8NH73 311 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 JPT1Q9UK76 154 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 IGHV3OR15-7A0A075B7D8 119 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 C20orf202A1L168 122 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 TMEM8BA6NDV4 472 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 PRR20EP86478 221 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 PRR20CP86479 221 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 PRR20DP86480 221 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 PRR20BP86481 221 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 PRR20AP86496 221 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 MAJINQ3KP22 176 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 CNEP1R1Q8N9A8 125 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 SSBP3Q9BWW4 388 aaPredicted RBP9.09□□□□□ -0.95
CCDC40-203ENST00000374877 IFI27L2Q9H2X8 130 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 OSTCQ9NRP0 149 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 TRGV8A0A0C4DH27 118 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 HLA-DQA1P01909 254 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 APCSP02743 223 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 USF1P22415 310 aaPredicted RBP9.09□□□□□ -0.95
CCDC40-203ENST00000374877 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms