RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 WFDC11Q8NEX6 87 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 OR4K17Q8NGC6 315 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 OR11H6Q8NGC7 330 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 BMFQ96LC9 184 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 GABARAPL3Q9BY60 117 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 GNB1LQ9BYB4 327 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 AP5S1Q9NUS5 200 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 TAS2R5Q9NYW4 299 aa6.49□□□□□ -1.37
USP48-203ENST00000374732 NOP16Q9Y3C1 178 aaKnown RBP6.49□□□□□ -1.37
USP48-203ENST00000374732 GTF3C1Q12789 2109 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 F8W1H4 67 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 CDC42EP2O14613 210 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 FABP2P12104 132 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 ZNF93P35789 620 aaPredicted RBP6.48□□□□□ -1.37
USP48-203ENST00000374732 IZUMO4Q1ZYL8 232 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 OR4C16Q8NGL9 310 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 OR1L3Q8NH93 324 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 MAL2Q969L2 176 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 SPRY4Q9C004 299 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 RERGLQ9H628 205 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 SAP30LQ9HAJ7 183 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 DLL3Q9NYJ7 618 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 A0A1W2PPM0 123 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 K7ENP7 123 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 OVOL1O14753 267 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 NDUFB4O95168 129 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 NMUP48645 174 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 HMGA2P52926 109 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 CRYBA2P53672 197 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 TAS2R19P59542 299 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 ZNF85Q03923 595 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 UNC119Q13432 240 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 ZNF672Q499Z4 452 aaPredicted RBP6.48□□□□□ -1.37
USP48-203ENST00000374732 OR10P1Q8NGE3 313 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 SSMEM1Q8WWF3 244 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 PLEKHB2Q96CS7 222 aa6.48□□□□□ -1.37
USP48-203ENST00000374732 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
USP48-203ENST00000374732 H3BRM9 83 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 CLDN14O95500 239 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 PLAUP00749 431 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 SLC25A5P05141 298 aaKnown RBP6.47□□□□□ -1.37
USP48-203ENST00000374732 RND2P52198 227 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 OR4X2Q8NGF9 303 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 OR52P1PQ8NH57 321 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 FGF13Q92913 245 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 PRELID3AQ96N28 172 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 COMMD9Q9P000 198 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 F11RQ9Y624 299 aaKnown RBP6.47□□□□□ -1.37
USP48-203ENST00000374732 C2orf16Q68DN1 1984 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 H7C1H1 209 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 HLA-DQA2P01906 255 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 WNT1P04628 370 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ELK1P19419 428 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 FBXW4P57775 412 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 RPL11P62913 178 aaKnown RBP6.47□□□□□ -1.37
USP48-203ENST00000374732 SYT14P1Q58G82 188 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ZNF550Q7Z398 422 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 MMD2Q8IY49 270 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 NEUROG1Q92886 237 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 RPUSD1Q9UJJ7 312 aaKnown RBP6.47□□□□□ -1.37
USP48-203ENST00000374732 FCN1O00602 326 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 NDUFC2O95298 119 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 WISP1O95388 367 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 IL5P05113 134 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 TACSTD2P09758 323 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 SLC25A1P53007 311 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 HERV-K104P61576 105 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 TCF15Q12870 199 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 FOXI1Q12951 378 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ELOCQ15369 112 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 SLC35E4Q6ICL7 350 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ZNF101Q8IZC7 436 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ZNF615Q8N8J6 731 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 LRTM2Q8N967 370 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 Q8N976 141 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ZNF114Q8NC26 417 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 NEURL3Q96EH8 262 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 GNPNAT1Q96EK6 184 aaPredicted RBP6.47□□□□□ -1.37
USP48-203ENST00000374732 GLIPR2Q9H4G4 154 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 PLEKHF2Q9H8W4 249 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 ZNF257Q9Y2Q1 563 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 KCNE3Q9Y6H6 103 aa6.47□□□□□ -1.37
USP48-203ENST00000374732 DOCK8Q8NF50 2099 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.46□□□□□ -1.38
USP48-203ENST00000374732 SLC17A2O00624 439 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 CD3DP04234 171 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 DRD3P35462 400 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 Q0VG73 95 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 LRRC37A5PQ49AS3 106 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 GEMIN6Q8WXD5 167 aaKnown RBP6.46□□□□□ -1.38
USP48-203ENST00000374732 SRSF12Q8WXF0 261 aaKnown RBP6.46□□□□□ -1.38
USP48-203ENST00000374732 TVP23CQ96ET8 276 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 DPH3Q96FX2 82 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 PSPNO60542 156 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 SEC11AP67812 179 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 PARM1Q6UWI2 310 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 ATOH7Q8N100 152 aa6.46□□□□□ -1.38
USP48-203ENST00000374732 WDYHV1Q96HA8 205 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms