RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PTPRDP23468 1912 aa8.63□□□□□ -1.03
CD28-202ENST00000374481 NPIPB13A6NJU9 1138 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 NPIPB4C9JG80 1138 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 K7EQS6 105 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 M0R3E3 92 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 PRR31Q5SQ13 230 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 SYT8Q8NBV8 401 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 BADQ92934 168 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 OBP2AQ9NY56 170 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 SYNGR1O43759 233 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 CD40P25942 277 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 DLX1P56177 255 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 RASL11AQ6T310 242 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 RBPMS2Q6ZRY4 209 aaKnown RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 RPS19BP1Q86WX3 136 aaKnown RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 ABCA7Q8IZY2 2146 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 ZNF501Q96CX3 271 aaPredicted RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 C19orf24Q9BVV8 132 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 RPP21Q9H633 154 aaKnown RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 PRNDQ9UKY0 176 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 BOKQ9UMX3 212 aaPredicted RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 UFC1Q9Y3C8 167 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 FANCMQ8IYD8 2048 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 CSRP1P21291 193 aaKnown RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 WIPI1Q5MNZ9 446 aaPredicted RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 C12orf49Q9H741 205 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 F8W1H4 67 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 UCN2Q96RP3 112 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 SRSF8Q9BRL6 282 aaKnown RBP8.62□□□□□ -1.03
CD28-202ENST00000374481 ANAPC10Q9UM13 185 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 TCF19Q9Y242 345 aa8.62□□□□□ -1.03
CD28-202ENST00000374481 WIPF3A6NGB9 483 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 PEX7O00628 323 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 PRELID3AQ96N28 172 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 IL23AQ9NPF7 189 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 RLFQ13129 1914 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 SHANK1Q9Y566 2161 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 DOCK4Q8N1I0 1966 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 SH2D7A6NKC9 451 aaPredicted RBP8.61□□□□□ -1.03
CD28-202ENST00000374481 LYZP61626 148 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 ZNF114Q8NC26 417 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 CFHR5Q9BXR6 569 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 HEATR1Q9H583 2144 aaKnown RBP8.61□□□□□ -1.03
CD28-202ENST00000374481 SMAD7O15105 426 aaKnown RBP8.61□□□□□ -1.03
CD28-202ENST00000374481 YPEL1O60688 119 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 TMEM14EPQ6UXP3 125 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 ATP5L2Q7Z4Y8 100 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 FADS6Q8N9I5 356 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 YPEL2Q96QA6 119 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 SPANXA1Q9NS26 97 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 PARP14Q460N5 1801 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 COX6CP09669 75 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 DSCR4P56555 118 aaPredicted RBP8.61□□□□□ -1.03
CD28-202ENST00000374481 OR1L1Q8NH94 360 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 SARAFQ96BY9 339 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 NPFFR1Q9GZQ6 430 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 HCFC2Q9Y5Z7 792 aa8.61□□□□□ -1.03
CD28-202ENST00000374481 ORM1P02763 201 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 COX8AP10176 69 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 ZC2HC1AQ96GY0 325 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
CD28-202ENST00000374481 TDRD15B5MCY1 1934 aaKnown RBP8.6□□□□□ -1.03
CD28-202ENST00000374481 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
CD28-202ENST00000374481 GAGE7O76087 117 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 RBP4P02753 201 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 CCL1P22362 96 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 PRTN3P24158 256 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 GAGE4Q13068 117 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 SNRNP40Q96DI7 357 aaKnown RBP8.6□□□□□ -1.03
CD28-202ENST00000374481 FOXC2Q99958 501 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 SCRT1Q9BWW7 348 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 RABAC1Q9UI14 185 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 DIDO1Q9BTC0 2240 aaKnown RBP8.6□□□□□ -1.03
CD28-202ENST00000374481 NKX2-8O15522 239 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 PSG4Q00888 419 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 EFNB3Q15768 340 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 ZNF658BQ4V348 819 aaPredicted RBP8.6□□□□□ -1.03
CD28-202ENST00000374481 RAB1CQ92928 201 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
CD28-202ENST00000374481 TMEM189A5PLL7 270 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 ZNF138P52744 262 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 DEFB108BQ8NET1 73 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 CRISPLD2Q9H0B8 497 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 A0A0G2JRQ6 117 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 IGKV1D-33P01593 117 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 IGKV1-33P01594 117 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 HBDP02042 147 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 VGLL1Q99990 258 aa8.59□□□□□ -1.03
CD28-202ENST00000374481 PHF7Q9BWX1 381 aaPredicted RBP8.59□□□□□ -1.03
CD28-202ENST00000374481 MRPL32Q9BYC8 188 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms