RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 PERPQ96FX8 193 aa13.55□□□□□ -0.24
PTPN20-203ENST00000374342 NPVFQ9HCQ7 196 aa13.55□□□□□ -0.24
PTPN20-203ENST00000374342 PLXNB1O43157 2135 aa13.55□□□□□ -0.24
PTPN20-203ENST00000374342 INS-IGF2F8WCM5 200 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 REG1AP05451 166 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 OR13C7P0DN81 318 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 RPL27AP46776 148 aaKnown RBP13.54□□□□□ -0.24
PTPN20-203ENST00000374342 LGALS4P56470 323 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 MMDQ15546 238 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 SVBPQ8N300 66 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-203ENST00000374342 TBX15Q96SF7 602 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 IGHV4-61A0A0C4DH41 118 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 DEFA4P12838 97 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 CD24P25063 80 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 ACOT6Q3I5F7 207 aaPredicted RBP13.54□□□□□ -0.24
PTPN20-203ENST00000374342 TEPPQ6URK8 271 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 PPP1R27Q86WC6 154 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 GNG13Q9P2W3 67 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 LSM4Q9Y4Z0 139 aaKnown RBP13.54□□□□□ -0.24
PTPN20-203ENST00000374342 PXMP4Q9Y6I8 212 aa13.54□□□□□ -0.24
PTPN20-203ENST00000374342 CTXND1A0A1B0GTU2 59 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 NDUFS8O00217 210 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 HMGB3O15347 200 aaKnown RBP13.53□□□□□ -0.24
PTPN20-203ENST00000374342 M6PRP20645 277 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 MAS1LP35410 378 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 OPRK1P41145 380 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 COMPP49747 757 aaPredicted RBP13.53□□□□□ -0.24
PTPN20-203ENST00000374342 HES1Q14469 280 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 SSMEM1Q8WWF3 244 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 C1orf159Q96HA4 380 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 RNF5Q99942 180 aa13.53□□□□□ -0.24
PTPN20-203ENST00000374342 NKX6-2Q9C056 277 aaPredicted RBP13.53□□□□□ -0.24
PTPN20-203ENST00000374342 FNDC10F2Z333 226 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 APELAP0DMC3 54 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 HABP2Q14520 560 aaPredicted RBP13.52□□□□□ -0.24
PTPN20-203ENST00000374342 ICAM4Q14773 271 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 GCSAMLQ5JQS6 135 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 MINOS1Q5TGZ0 78 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 CCDC144NLQ6NUI1 221 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 ACTR3CQ9C0K3 210 aaPredicted RBP13.52□□□□□ -0.24
PTPN20-203ENST00000374342 KCNIP2Q9NS61 270 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 MINOS1-NBL1R4GNA1 71 aa13.52□□□□□ -0.24
PTPN20-203ENST00000374342 IGLC7A0M8Q6 106 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 ZFP92A6NM28 416 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 VWC2LB2RUY7 222 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 MOSP00540 346 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 CDC34P49427 236 aaPredicted RBP13.52□□□□□ -0.25
PTPN20-203ENST00000374342 CD69Q07108 199 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 ZNF506Q5JVG8 444 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 SLC16A13Q7RTY0 426 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
PTPN20-203ENST00000374342 RXFP4Q8TDU9 374 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 P2RX4Q99571 388 aa13.52□□□□□ -0.25
PTPN20-203ENST00000374342 IGHV4-30-2A0A087WSY4 118 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 OOSP1A8MZH6 123 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 NBR2O15453 112 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 YIF1AO95070 293 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 SNRNP70P08621 437 aaKnown RBP13.51□□□□□ -0.25
PTPN20-203ENST00000374342 SUB1P53999 127 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN20-203ENST00000374342 BTN1A1Q13410 526 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 FBLN7Q53RD9 439 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 SLC35B3Q9H1N7 401 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 SOX15O60248 233 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 AREGP15514 252 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 UBE2E1P51965 193 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 RAB31Q13636 194 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 GAMTQ14353 236 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 STPG3Q8N7X2 389 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 EAF1Q96JC9 268 aaPredicted RBP13.51□□□□□ -0.25
PTPN20-203ENST00000374342 SLC35E1Q96K37 410 aa13.51□□□□□ -0.25
PTPN20-203ENST00000374342 TBL2Q9Y4P3 447 aaKnown RBP13.51□□□□□ -0.25
PTPN20-203ENST00000374342 ASH1LQ9NR48 2969 aaKnown RBP13.5□□□□□ -0.25
PTPN20-203ENST00000374342 FCN1O00602 326 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 CYB5BO43169 146 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 SNAPINO95295 136 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 BCL2P10415 239 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 B2MP61769 119 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 MLANAQ16655 118 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 TMEM144Q7Z5S9 345 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 IQCF2Q8IXL9 164 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 OR2T10Q8NGZ9 312 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 SRSF12Q8WXF0 261 aaKnown RBP13.5□□□□□ -0.25
PTPN20-203ENST00000374342 SMDT1Q9H4I9 107 aa13.5□□□□□ -0.25
PTPN20-203ENST00000374342 TMA7Q9Y2S6 64 aaKnown RBP13.5□□□□□ -0.25
PTPN20-203ENST00000374342 NPBWR1P48145 328 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 CEBPGP53567 150 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 SSBP2P81877 361 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-203ENST00000374342 C19orf35Q6ZS72 473 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 RNASEH2CQ8TDP1 164 aaKnown RBP13.49□□□□□ -0.25
PTPN20-203ENST00000374342 ACY3Q96HD9 319 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 POLR3KQ9Y2Y1 108 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-203ENST00000374342 MED13LQ71F56 2210 aa13.49□□□□□ -0.25
PTPN20-203ENST00000374342 SEC14L6B5MCN3 397 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms