RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 H7C2Y5 167 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 MBP02144 154 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 REG1BP48304 166 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ZNF137PP52743 207 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ZNF506Q5JVG8 444 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ACSM6Q6P461 480 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 TMEM88Q6PEY1 159 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 LCN15Q6UWW0 184 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 SSX7Q7RTT5 188 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ZNF709Q8N972 641 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 LHX4Q969G2 390 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ST6GALNAC6Q969X2 333 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 TMEM133Q9H2Q1 129 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 BET1LQ9NYM9 111 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ZNF257Q9Y2Q1 563 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 IGHV3OR16-10A0A075B7F0 116 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 CENPVL3A0A0U1RRI6 287 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 C17orf112F2Z3M2 114 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 SAA1P0DJI8 122 aaPredicted RBP12.89□□□□□ -0.35
C9orf78-201ENST00000372447 OR13C7P0DN81 318 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 IGHV4-38-2P0DP08 117 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 KLRD1Q13241 179 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 ICAM4Q14773 271 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 TMEM177Q53S58 311 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 HCP5Q6MZN7 132 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 TMEM170AQ8WVE7 144 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 HARBI1Q96MB7 349 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 NABP2Q9BQ15 211 aa12.89□□□□□ -0.35
C9orf78-201ENST00000372447 NSD1Q96L73 2696 aaPredicted RBP12.88□□□□□ -0.35
C9orf78-201ENST00000372447 TRAV40A0A0B4J280 105 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 KBTBD11O94819 623 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 FSHBP01225 129 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 HSPB1P04792 205 aaKnown RBP12.88□□□□□ -0.35
C9orf78-201ENST00000372447 MYOD1P15172 320 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 HOXB4P17483 251 aaPredicted RBP12.88□□□□□ -0.35
C9orf78-201ENST00000372447 DIAPH2-AS1Q14236 149 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 PDPNQ86YL7 162 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 CBLN2Q8IUK8 224 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
C9orf78-201ENST00000372447 NANPQ8TBE9 248 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 FLYWCH2Q96CP2 140 aaKnown RBP12.88□□□□□ -0.35
C9orf78-201ENST00000372447 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 WDR83OSQ9Y284 106 aa12.88□□□□□ -0.35
C9orf78-201ENST00000372447 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
C9orf78-201ENST00000372447 MAP1LC3B2A6NCE7 125 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 IFNA4P05014 189 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 DLK1P80370 383 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 PRCDQ00LT1 54 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 KHDC3LQ587J8 217 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 SOHLH1Q5JUK2 328 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 MAP1LC3BQ9GZQ8 125 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 ZFHX3Q15911 3703 aa12.87□□□□□ -0.35
C9orf78-201ENST00000372447 LOC102723971A0A1B0GUV8 181 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 SMCO3A2RU48 225 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 SRP19P09132 144 aaKnown RBP12.86□□□□□ -0.35
C9orf78-201ENST00000372447 COX7A1P24310 79 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 NPY1RP25929 384 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 IL3RAP26951 378 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 FGF8P55075 233 aaPredicted RBP12.86□□□□□ -0.35
C9orf78-201ENST00000372447 PNKDQ8N490 385 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 OR10G4Q8NGN3 311 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 OR10G9Q8NGN4 311 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 OR10G7Q8NGN6 311 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 HINT2Q9BX68 163 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 PLEKHA3Q9HB20 300 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 NAV3Q8IVL0 2385 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 TEX50A0A1B0GTY4 177 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 A0A1W2PRD5 423 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 A0A1W2PRF3 423 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 A0A1W2PRM7 423 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 MPDU1O75352 247 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 HNF1AP20823 631 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 TREML4Q6UXN2 200 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 OR5B3Q8NH48 314 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 WASHC3Q9Y3C0 194 aa12.86□□□□□ -0.35
C9orf78-201ENST00000372447 MXRA5Q9NR99 2828 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 CTXND1A0A1B0GTU2 59 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 CA2P00918 260 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 OPN1MWP04001 364 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 OPN1MW2P0DN77 364 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 OPN1MW3P0DN78 364 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 BCL2P10415 239 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 ATF4P18848 351 aaPredicted RBP12.85□□□□□ -0.35
C9orf78-201ENST00000372447 RAB13P51153 203 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 UBE2E1P51965 193 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 PRRX1P54821 245 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 RUSC1-AS1Q66K80 236 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 BRD3OSQ6XYD6 125 aa12.85□□□□□ -0.35
C9orf78-201ENST00000372447 CDC42EP3Q9UKI2 254 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms