RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 TDGF1P3P51864 188 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 ST6GALNAC3Q8NDV1 305 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 JKAMPQ9P055 326 aa8.24□□□□□ -1.09
COL4A6-202ENST00000372216 RRHO14718 337 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 CYB561D1Q8N8Q1 229 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 A0A087X0M5 115 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 A0A1B0GX30 115 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 K7ERU9 68 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 CFDP00746 253 aaPredicted RBP8.23□□□□□ -1.09
COL4A6-202ENST00000372216 FOXF2Q12947 444 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 CRIM1Q9NZV1 1036 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 COL4A6Q14031 1691 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 IGLV3-32A0A0A0MS00 114 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 CGB3P0DN86 165 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 LEMD1Q68G75 181 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 MRPL20Q9BYC9 149 aaKnown RBP8.23□□□□□ -1.09
COL4A6-202ENST00000372216 A8MWL6 223 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 FBLN7Q53RD9 439 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 FAM90A1Q86YD7 464 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 SSC4DQ8WTU2 575 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 NRIP2Q9BQI9 281 aa8.23□□□□□ -1.09
COL4A6-202ENST00000372216 CXCL2P19875 107 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 CNTFRP26992 372 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 PPIFP30405 207 aaKnown RBP8.22□□□□□ -1.09
COL4A6-202ENST00000372216 MEF2CQ06413 473 aaPredicted RBP8.22□□□□□ -1.09
COL4A6-202ENST00000372216 PRR31Q5SQ13 230 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 PIKFYVEQ9Y2I7 2098 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 UCP3P55916 312 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 SRSF6Q13247 344 aaKnown RBP8.22□□□□□ -1.09
COL4A6-202ENST00000372216 C12orf54Q6X4T0 127 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
COL4A6-202ENST00000372216 ZIC4Q8N9L1 334 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 TM2D1Q9BX74 207 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 LINC00312Q9Y6C7 94 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 PQLC2LA1A4F0 135 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 C1QL1O75973 258 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 Q0VFX4 171 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 TTC9CQ8N5M4 171 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.22□□□□□ -1.09
COL4A6-202ENST00000372216 SMIM8Q96KF7 97 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 JMJD8Q96S16 334 aa8.22□□□□□ -1.09
COL4A6-202ENST00000372216 KLRD1Q13241 179 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 TEX45Q8NA69 505 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 FAM110DQ8TAY7 271 aaPredicted RBP8.21□□□□□ -1.09
COL4A6-202ENST00000372216 ZSWIM8A7E2V4 1837 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 MDC1Q14676 2089 aaKnown RBP8.21□□□□□ -1.09
COL4A6-202ENST00000372216 A0A0G2JK05 382 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 C8orf88P0DMB2 117 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 TMEM167AQ8TBQ9 72 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 PHLDA1Q8WV24 401 aaPredicted RBP8.21□□□□□ -1.09
COL4A6-202ENST00000372216 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 MGAMO43451 1857 aa8.21□□□□□ -1.09
COL4A6-202ENST00000372216 C7orf66A4D0T2 115 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 TRGC1P0CF51 173 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 BRD3OSQ6XYD6 125 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 PRSS22Q9GZN4 317 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 CCL3L1P16619 93 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 GATA2P23769 480 aaPredicted RBP8.21□□□□□ -1.1
COL4A6-202ENST00000372216 TGIF2-C20orf24A0A0A6YYL0 155 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 VENTXO95231 258 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 TTC32Q5I0X7 151 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 CHAC2Q8WUX2 184 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 ST6GALNAC6Q969X2 333 aa8.21□□□□□ -1.1
COL4A6-202ENST00000372216 GATA4P43694 442 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 CYP2G1PQ6ZSU1 146 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 OSR1Q8TAX0 266 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 A0A0G2JLM5 398 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 FAM74A7A6NL05 159 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 TMEM136Q6ZRR5 245 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 CITED2Q99967 270 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 CHCHD5Q9BSY4 110 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 ZNF506Q5JVG8 444 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 ERASQ7Z444 233 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 STPG2Q8N412 459 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 SLC25A28Q96A46 364 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 UBE2E2Q96LR5 201 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 THADAQ6YHU6 1953 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 EVI2AP22794 236 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 SRIP30626 198 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 TIMP3P35625 211 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 LYZL4Q96KX0 146 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 RBMY1BA6NDE4 496 aaKnown RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 RBMY1EA6NEQ0 496 aaKnown RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 C17orf98A8MV24 154 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 RBMY1DP0C7P1 496 aaKnown RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 RBMY1A1P0DJD3 496 aaKnown RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 RBMY1CP0DJD4 496 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 PLP1P60201 277 aa8.2□□□□□ -1.1
COL4A6-202ENST00000372216 MRPL32Q9BYC8 188 aaKnown RBP8.2□□□□□ -1.1
COL4A6-202ENST00000372216 SOD3P08294 240 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 LINC00271P0C7V0 271 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 C17orf82Q86X59 251 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-202ENST00000372216 PLPPR1Q8TBJ4 325 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 WBP1Q96G27 269 aa8.19□□□□□ -1.1
COL4A6-202ENST00000372216 SCGB3A1Q96QR1 104 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms