RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 MEGF9Q9H1U4 602 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 PFDN2Q9UHV9 154 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 FAM96BQ9Y3D0 163 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 TRIM77I1YAP6 450 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 FBLN7Q53RD9 439 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 FAM120AOSQ5T036 256 aa20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 TMEM182Q6ZP80 229 aaPredicted RBP20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 SRSF12Q8WXF0 261 aaKnown RBP20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 SRSF8Q9BRL6 282 aaKnown RBP20.97■□□□□ 0.95
ATPAF1-202ENST00000371937 NBPF19A0A087WUL8 3843 aa20.96■□□□□ 0.95
ATPAF1-202ENST00000371937 IGLC7A0M8Q6 106 aa20.96■□□□□ 0.95
ATPAF1-202ENST00000371937 AVPP01185 164 aa20.96■□□□□ 0.95
ATPAF1-202ENST00000371937 PRH1P02810 166 aa20.95■□□□□ 0.94
ATPAF1-202ENST00000371937 SSBP2P81877 361 aaPredicted RBP20.95■□□□□ 0.94
ATPAF1-202ENST00000371937 COMMD7Q86VX2 200 aa20.95■□□□□ 0.94
ATPAF1-202ENST00000371937 RSG1Q9BU20 258 aa20.95■□□□□ 0.94
ATPAF1-202ENST00000371937 TIMM9Q9Y5J7 89 aa20.95■□□□□ 0.94
ATPAF1-202ENST00000371937 A0A0U1RQK1 487 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 FNDC10F2Z333 226 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 MDKP21741 143 aaPredicted RBP20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 FGF7P21781 194 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 BPIFB3P59826 476 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 SERF2P84101 59 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 KLF17Q5JT82 389 aaPredicted RBP20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 SMCO3A2RU48 225 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 MPDU1O75352 247 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 NPVFQ9HCQ7 196 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 PARP11Q9NR21 331 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 WDR83OSQ9Y284 106 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 RFNGQ9Y644 331 aa20.94■□□□□ 0.94
ATPAF1-202ENST00000371937 PLXNB1O43157 2135 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 TEX22C9J3V5 150 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 AKR1C8PQ5T2L2 129 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 ZNF562Q6V9R5 426 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 CENPVQ7Z7K6 275 aaPredicted RBP20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 ZNF114Q8NC26 417 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 RNASEH2CQ8TDP1 164 aaKnown RBP20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 P2RX4Q99571 388 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 FBXO7Q9Y3I1 522 aa20.93■□□□□ 0.94
ATPAF1-202ENST00000371937 FBP1P09467 338 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 CAMLGP49069 296 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 FXYD3Q14802 87 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 BTNL8Q6UX41 500 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 ZNF709Q8N972 641 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 UNC79Q9P2D8 2635 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 PXDC1Q5TGL8 231 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 CYB5R2Q6BCY4 276 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 Q6ZRG5 221 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 CACNG8Q8WXS5 425 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 CITED4Q96RK1 184 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 CR1P17927 2039 aa20.92■□□□□ 0.94
ATPAF1-202ENST00000371937 C17orf112F2Z3M2 114 aa20.91■□□□□ 0.94
ATPAF1-202ENST00000371937 ARSJQ5FYB0 599 aaPredicted RBP20.91■□□□□ 0.94
ATPAF1-202ENST00000371937 TREML4Q6UXN2 200 aa20.91■□□□□ 0.94
ATPAF1-202ENST00000371937 SSMEM1Q8WWF3 244 aa20.91■□□□□ 0.94
ATPAF1-202ENST00000371937 FOXC2Q99958 501 aa20.91■□□□□ 0.94
ATPAF1-202ENST00000371937 NPCDR1Q9BY65 106 aa20.91■□□□□ 0.94
ATPAF1-202ENST00000371937 REG1AP05451 166 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 AREGP15514 252 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 GPX4P36969 197 aaPredicted RBP20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 DPPA3Q6W0C5 159 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 Q8N9W7 124 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 WFDC11Q8NEX6 87 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 RASL11BQ9BPW5 248 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 CREBBPQ92793 2442 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 S100A1P23297 94 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 CX3CL1P78423 397 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 CD69Q07108 199 aa20.9■□□□□ 0.94
ATPAF1-202ENST00000371937 OR1P1Q8NH06 330 aa20.89■□□□□ 0.93
ATPAF1-202ENST00000371937 FAM213BQ8TBF2 198 aa20.89■□□□□ 0.93
ATPAF1-202ENST00000371937 ABHD5Q8WTS1 349 aa20.89■□□□□ 0.93
ATPAF1-202ENST00000371937 SSX3Q99909 188 aa20.89■□□□□ 0.93
ATPAF1-202ENST00000371937 SVEP1Q4LDE5 3571 aa20.89■□□□□ 0.93
ATPAF1-202ENST00000371937 HLA-DRB1P01911 266 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 FHITP49789 147 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 AKR1C1Q04828 323 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 ZNF616Q08AN1 781 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 PVRIGQ6DKI7 326 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 TEPPQ6URK8 271 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 ARPC1AQ92747 370 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 NUDT19A8MXV4 375 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 SOX15O60248 233 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 APELAP0DMC3 54 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 PIFOQ8TCI5 191 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 HRH4Q9H3N8 390 aa20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 LSM4Q9Y4Z0 139 aaKnown RBP20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 F11RQ9Y624 299 aaKnown RBP20.88■□□□□ 0.93
ATPAF1-202ENST00000371937 CORTO00230 105 aa20.87■□□□□ 0.93
ATPAF1-202ENST00000371937 RAB31Q13636 194 aa20.87■□□□□ 0.93
ATPAF1-202ENST00000371937 AANATQ16613 207 aa20.87■□□□□ 0.93
ATPAF1-202ENST00000371937 RBM14Q96PK6 669 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-202ENST00000371937 NAV3Q8IVL0 2385 aa20.87■□□□□ 0.93
ATPAF1-202ENST00000371937 FASNP49327 2511 aaKnown RBP20.86■□□□□ 0.93
ATPAF1-202ENST00000371937 MFSD2BA6NFX1 497 aa20.86■□□□□ 0.93
ATPAF1-202ENST00000371937 LYPD6BQ8NI32 183 aa20.86■□□□□ 0.93
ATPAF1-202ENST00000371937 NANPQ8TBE9 248 aa20.86■□□□□ 0.93
ATPAF1-202ENST00000371937 MARC2Q969Z3 335 aa20.86■□□□□ 0.93
ATPAF1-202ENST00000371937 TEX46H3BTG2 121 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 MBP02144 154 aa20.85■□□□□ 0.93
ATPAF1-202ENST00000371937 OPRK1P41145 380 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms