RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TMEM8BA6NDV4 472 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 H3BTX0 84 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 SEMA5BQ9P283 1151 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 MLNRO43193 412 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 TRACP01848 142 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 BGLAPP02818 100 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 ORMDL2Q53FV1 153 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 IGHV5-51A0A0C4DH38 117 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 MGST3O14880 152 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 MYF5P13349 255 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 LHX2P50458 406 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 PLXND1Q9Y4D7 1925 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 C9JCJ5 164 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 MPV17P39210 176 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 C17orf99Q6UX52 265 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 SMPXQ9UHP9 88 aa13.03□□□□□ -0.32
COL5A1-201ENST00000371817 DSCAML1Q8TD84 2053 aa13.02□□□□□ -0.32
COL5A1-201ENST00000371817 PPBPP02775 128 aa13.02□□□□□ -0.32
COL5A1-201ENST00000371817 INO80CQ6PI98 192 aaPredicted RBP13.02□□□□□ -0.32
COL5A1-201ENST00000371817 TMEM86BQ8N661 226 aa13.02□□□□□ -0.32
COL5A1-201ENST00000371817 C1orf43Q9BWL3 253 aa13.02□□□□□ -0.32
COL5A1-201ENST00000371817 CACNA1HO95180 2353 aa13.02□□□□□ -0.33
COL5A1-201ENST00000371817 C16orf47Q6ZP98 133 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-201ENST00000371817 PEX11BO96011 259 aa13.02□□□□□ -0.33
COL5A1-201ENST00000371817 MYEOVQ96EZ4 313 aa13.02□□□□□ -0.33
COL5A1-201ENST00000371817 MALP21145 153 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 SPINK14Q6IE38 97 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 SELENOKQ9Y6D0 94 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 SRSF3P84103 164 aaKnown RBP13.01□□□□□ -0.33
COL5A1-201ENST00000371817 FOXD3Q9UJU5 478 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-201ENST00000371817 TRPM7Q96QT4 1865 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 ZPLD1Q8TCW7 415 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 NAA38Q9BRA0 125 aaKnown RBP13.01□□□□□ -0.33
COL5A1-201ENST00000371817 LOC285556D6RIA3 1793 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 IL6RP08887 468 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-201ENST00000371817 OR9G9P0C7N8 305 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 ATP5G3P48201 142 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 PSG3Q16557 428 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 TRBV5-7A0A0A0MS05 114 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 NAPSAO96009 420 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 LIMS1P48059 325 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 TDHQ8IZJ6 230 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 COLCA2A8K830 154 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 CCL20P78556 96 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 FAM27BQ5VT28 67 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 MSGN1A6NI15 193 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 ITGB1BP1O14713 200 aa13.01□□□□□ -0.33
COL5A1-201ENST00000371817 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 IGKV3D-20A0A0C4DH25 116 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 NPPCP23582 126 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 GUSBP1Q15486 140 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 NEUROG3Q9Y4Z2 214 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 MUC21A0A0G2JKD1 596 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 MUC21A0A140T8X8 626 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 TDGF1P13385 188 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 GZMMP51124 257 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 MUC21Q5SSG8 566 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 TRBV24-1A0A075B6N3 115 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 C1QTNF9P0C862 333 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 TPRX1Q8N7U7 411 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 NPIPB3Q92617 1050 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 Q96M66 194 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 PTGDSP41222 190 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 TDGF1P3P51864 188 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 DNAJC30Q96LL9 226 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 RASL10BQ96S79 203 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 CALYQ9NYX4 217 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 A0A1W2PRE2 83 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 VWC2LB2RUY7 222 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
COL5A1-201ENST00000371817 THADAQ6YHU6 1953 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
COL5A1-201ENST00000371817 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 SAXO1Q8IYX7 474 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 OSTCQ9NRP0 149 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 SPTY2D1-AS1A0A0U1RR47 76 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 TFF3Q07654 80 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 MPV17L2Q567V2 206 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 SBF2Q86WG5 1849 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 PYY3Q5JQD4 70 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 FBXW9Q5XUX1 488 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 TOMM40O96008 361 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 IL11P20809 199 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 UNQ9370/PRO34162Q6UXP9 181 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 MORN3Q6PF18 240 aaPredicted RBP12.99□□□□□ -0.33
COL5A1-201ENST00000371817 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
COL5A1-201ENST00000371817 A8MWP6 167 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 EDIL3O43854 480 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 CT83Q5H943 113 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 GATD1Q8NB37 220 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 TSC2P49815 1807 aa12.98□□□□□ -0.33
COL5A1-201ENST00000371817 LY75O60449 1722 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms