RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 Q0VG73 95 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 VWC2Q2TAL6 325 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 RPS19BP1Q86WX3 136 aaKnown RBP9.9□□□□□ -0.82
PTPN1-201ENST00000371621 TEX29Q8N6K0 151 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 CNEP1R1Q8N9A8 125 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 C10orf35Q96D05 121 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 ZNF414Q96IQ9 312 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 DLL3Q9NYJ7 618 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 C17orf98A8MV24 154 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 FOXH1O75593 365 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 PPIFP30405 207 aaKnown RBP9.9□□□□□ -0.82
PTPN1-201ENST00000371621 LGALS4P56470 323 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 IGFBP7Q16270 282 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 WIPI1Q5MNZ9 446 aaPredicted RBP9.9□□□□□ -0.82
PTPN1-201ENST00000371621 TIMM23BQ5SRD1 257 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 C18orf32Q8TCD1 76 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 BADQ92934 168 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 PAXXQ9BUH6 204 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
PTPN1-201ENST00000371621 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.83
PTPN1-201ENST00000371621 IGFBP2P18065 325 aa9.9□□□□□ -0.83
PTPN1-201ENST00000371621 EMP1P54849 157 aa9.9□□□□□ -0.83
PTPN1-201ENST00000371621 LINC00205P59089 165 aa9.9□□□□□ -0.83
PTPN1-201ENST00000371621 ZFP36L1Q07352 338 aaKnown RBP9.9□□□□□ -0.83
PTPN1-201ENST00000371621 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.83
PTPN1-201ENST00000371621 TMEM160Q9NX00 188 aa9.9□□□□□ -0.83
PTPN1-201ENST00000371621 DNAH14Q0VDD8 3507 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 SCN10AQ9Y5Y9 1956 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 E9PLN8 166 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 SLAQ13239 276 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 AMTNQ6UX39 209 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 VCANP13611 3396 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 hADV38S2A0JD32 116 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 YPEL3P61236 119 aaPredicted RBP9.89□□□□□ -0.83
PTPN1-201ENST00000371621 LHX8Q68G74 356 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 SRSF12Q8WXF0 261 aaKnown RBP9.89□□□□□ -0.83
PTPN1-201ENST00000371621 STRADBQ9C0K7 418 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 MRPL16Q9NX20 251 aaKnown RBP9.89□□□□□ -0.83
PTPN1-201ENST00000371621 TAX1BP3O14907 124 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 MPDU1O75352 247 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 CX3CL1P78423 397 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 GAGE13Q4V321 117 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF479Q96JC4 524 aa9.89□□□□□ -0.83
PTPN1-201ENST00000371621 IGKV1-27A0A075B6S5 117 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 IGKV1-5P01602 117 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 RHBDD2Q6NTF9 364 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 LHFPL4Q7Z7J7 247 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 KLK15Q9H2R5 256 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 PCNX1Q96RV3 2341 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 COL9A1P20849 921 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 RIGQ13278 110 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF718Q3SXZ3 478 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 SH2D6Q7Z4S9 175 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF502Q8TBZ5 544 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 CT55Q8WUE5 264 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 CDX2Q99626 313 aaPredicted RBP9.88□□□□□ -0.83
PTPN1-201ENST00000371621 MMP17Q9ULZ9 603 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 PRUNE2Q8WUY3 3088 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 PRR14LQ5THK1 2151 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 CELA3AP09093 270 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 OR2H1Q9GZK4 316 aa9.88□□□□□ -0.83
PTPN1-201ENST00000371621 SNCGO76070 127 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 ZADH2Q8N4Q0 377 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 DEFB125Q8N687 156 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 TNFRSF19Q9NS68 423 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 FAM90A26D6RGX4 464 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 J3QR06 171 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 CKS2P33552 79 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF658BQ4V348 819 aaPredicted RBP9.87□□□□□ -0.83
PTPN1-201ENST00000371621 C10orf113Q5VZT2 155 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 C1orf122Q6ZSJ8 110 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 TRAV9-1A0A075B6T8 112 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 SPTY2D1-AS1A0A0U1RR47 76 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF716A6NP11 495 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 GNG5P63218 68 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 ABHD17BQ5VST6 288 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 EBLN2Q6P2I7 272 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 LEAP2Q969E1 77 aa9.87□□□□□ -0.83
PTPN1-201ENST00000371621 BEX4Q9NWD9 120 aaPredicted RBP9.87□□□□□ -0.83
PTPN1-201ENST00000371621 NPPCP23582 126 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 CD300EQ496F6 205 aaPredicted RBP9.86□□□□□ -0.83
PTPN1-201ENST00000371621 FAM27BQ5VT28 67 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 DNASE2BQ8WZ79 361 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 OR2H2O95918 312 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 VEGFBP49765 207 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 CYSLTR1Q9Y271 337 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 TNCP24821 2201 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 TCF20Q9UGU0 1960 aaKnown RBP9.86□□□□□ -0.83
PTPN1-201ENST00000371621 C8orf88P0DMB2 117 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 TNFRSF4P43489 277 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 EFNB3Q15768 340 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF826PQ6ZT77 177 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 RND1Q92730 232 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 ARPC1AQ92747 370 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 IL23AQ9NPF7 189 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 ZNF391Q9UJN7 358 aa9.86□□□□□ -0.83
PTPN1-201ENST00000371621 H3BMG7 143 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms