RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 RNASE6Q93091 150 aaKnown RBP10.51□□□□□ -0.73
GPC3-201ENST00000370818 PARLQ9H300 379 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 DSCAML1Q8TD84 2053 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 ZNF320A2RRD8 509 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 TOMM40O96008 361 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 ZDHHC16Q969W1 377 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 OR4C12Q96R67 309 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 HSPB9Q9BQS6 159 aa10.51□□□□□ -0.73
GPC3-201ENST00000370818 TMEM250H0YL14 139 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 TMEM178BH3BS89 294 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 ZG16O60844 167 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 OR9G9P0C7N8 305 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 LINC00310P59036 64 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 TPPP2P59282 170 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 KLRB1Q12918 225 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 OR8G2PQ6IF36 304 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 ZNF439Q8NDP4 499 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 DDB2Q92466 427 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 CORO2AQ92828 525 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 RAB9BQ9NP90 201 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 SLC45A2Q9UMX9 530 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 PKDREJQ9NTG1 2253 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 PPBPP02775 128 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 TMEM11P17152 192 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 HBG1P69891 147 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 HBG2P69892 147 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 Q6ZVH6 145 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 SCGB1C1Q8TD33 95 aa10.5□□□□□ -0.73
GPC3-201ENST00000370818 SAA2-SAA4A0A096LPE2 208 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 TRAV38-1A0A0B4J264 116 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.49□□□□□ -0.73
GPC3-201ENST00000370818 GRIFINA4D1Z8 144 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 RBFOX2O43251 390 aaKnown RBP eCLIP10.49□□□□□ -0.734e-7■■■■□ 23.1
GPC3-201ENST00000370818 SAA2P0DJI9 122 aaPredicted RBP10.49□□□□□ -0.73
GPC3-201ENST00000370818 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
GPC3-201ENST00000370818 TMEM144Q7Z5S9 345 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 LINC01551Q86U37 167 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 VKORC1L1Q8N0U8 176 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 ST6GALNAC3Q8NDV1 305 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 CCL17Q92583 94 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 PSMG3Q9BT73 122 aaPredicted RBP10.49□□□□□ -0.73
GPC3-201ENST00000370818 IDI2-AS1Q9NZ38 188 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 PMS2P5A8MQ11 134 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 VSTM5A8MXK1 200 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 RBMXL2O75526 392 aaKnown RBP10.49□□□□□ -0.73
GPC3-201ENST00000370818 ESDP10768 282 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 CTRLP40313 264 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 LRRC75BQ2VPJ9 315 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 SPINK9Q5DT21 86 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 LINC01560Q8TB33 94 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 LHX4Q969G2 390 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 SLC25A10Q9UBX3 287 aaPredicted RBP10.49□□□□□ -0.73
GPC3-201ENST00000370818 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
GPC3-201ENST00000370818 PPIAL4EA0A075B759 164 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 FAM90A27PA6NNH2 459 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 PPIAL4DF5H284 164 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
GPC3-201ENST00000370818 PLAUP00749 431 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 PPIAL4FP0DN26 164 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 ADMP35318 185 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 PLA2G5P39877 138 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 SERF2P84101 59 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 SLC38A11Q08AI6 406 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 CDSNQ15517 529 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 FBXL19-AS1Q494R0 122 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 PRAMEF5Q5TYX0 476 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 S1PR3Q99500 378 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 QTRT1Q9BXR0 403 aaKnown RBP10.48□□□□□ -0.73
GPC3-201ENST00000370818 CHTOPQ9Y3Y2 248 aaKnown RBP10.48□□□□□ -0.73
GPC3-201ENST00000370818 LINC00312Q9Y6C7 94 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 hADV38S2A0JD32 116 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 CCL21O00585 134 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 ZNF709Q8N972 641 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 WDR61Q9GZS3 305 aaKnown RBP10.48□□□□□ -0.73
GPC3-201ENST00000370818 PATZ1Q9HBE1 687 aaKnown RBP10.48□□□□□ -0.73
GPC3-201ENST00000370818 SLC39A9Q9NUM3 307 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 RPUSD1Q9UJJ7 312 aaKnown RBP10.48□□□□□ -0.73
GPC3-201ENST00000370818 TANC2Q9HCD6 1990 aa10.48□□□□□ -0.73
GPC3-201ENST00000370818 ATRXP46100 2492 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 APOBEC3AP31941 199 aaPredicted RBP10.47□□□□□ -0.73
GPC3-201ENST00000370818 Q8N976 141 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.47□□□□□ -0.73
GPC3-201ENST00000370818 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 DYNLRB1Q9NP97 96 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 FAM90A9PA6NNJ1 464 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 VENTXO95231 258 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 YPEL3P61236 119 aaPredicted RBP10.47□□□□□ -0.73
GPC3-201ENST00000370818 RPL31P62899 125 aaKnown RBP10.47□□□□□ -0.73
GPC3-201ENST00000370818 FOXL1Q12952 345 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 EFNB3Q15768 340 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 SMIM15Q7Z3B0 74 aa10.47□□□□□ -0.73
GPC3-201ENST00000370818 RPP25LQ8N5L8 163 aaKnown RBP10.47□□□□□ -0.73
GPC3-201ENST00000370818 NUDT10Q8NFP7 164 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms