RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 M0R1X1 148 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 CLDN14O95500 239 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 FXYD3Q14802 87 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 VKORC1L1Q8N0U8 176 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 MBNL3Q9NUK0 354 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 THYN1Q9P016 225 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 KLF13Q9Y2Y9 288 aaPredicted RBP13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 MGST1P10620 155 aaKnown RBP13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 PMCHL1Q16048 86 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 DHRS13Q6UX07 377 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 SPATA12Q7Z6I5 190 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 NPCDR1Q9BY65 106 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 CDC42EP3Q9UKI2 254 aa13.24□□□□□ -0.29
SYNCRIP-202ENST00000369622 NPIPB11E5RHQ5 1161 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 TIMP3P35625 211 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 CEACAM3P40198 252 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 ERVK11-1P61568 191 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 RBPJQ06330 500 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 BVES-AS1Q5T3Y7 98 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 KLF14Q8TD94 323 aaPredicted RBP13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 SPRR3Q9UBC9 169 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 TRAV9-2A0A087WT02 112 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 PPIAL4DF5H284 164 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 TCTAP57738 103 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 ZNF146Q15072 292 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 Q6ZR03 302 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 LINC00473A8K010 186 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 TIMM8AO60220 97 aaPredicted RBP13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 FOXE3Q13461 319 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 CLCF1Q9UBD9 225 aa13.23□□□□□ -0.29
SYNCRIP-202ENST00000369622 A0A1W2PPV4 95 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 FCGR3BO75015 233 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 Q0VG73 95 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 WDR73Q6P4I2 378 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 SH2D7A6NKC9 451 aaPredicted RBP13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 AZU1P20160 251 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 IGHV1-2P23083 117 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 BRWD1-AS2P59051 145 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 MMD2Q8IY49 270 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 TRIB1Q96RU8 372 aa13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 QTRT1Q9BXR0 403 aaKnown RBP13.22□□□□□ -0.29
SYNCRIP-202ENST00000369622 OOEPA6NGQ2 149 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 TNFSF15O95150 251 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 GNG12Q9UBI6 72 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 WISP2O76076 250 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 NPY1RP25929 384 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 COQ2Q96H96 371 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 PMCHL2Q9BQD1 86 aa13.21□□□□□ -0.29
SYNCRIP-202ENST00000369622 CNOT1A5YKK6 2376 aaKnown RBP13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 AHRRA9YTQ3 701 aa13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 G3V4G9 280 aa13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 TNXAQ16473 311 aa13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 FAM71F2Q6NXP2 309 aa13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 PNKDQ8N490 385 aa13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 HEYLQ9NQ87 328 aaPredicted RBP13.21□□□□□ -0.3
SYNCRIP-202ENST00000369622 TRAV26-1A0A087WT03 109 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 HSBP1O75506 76 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 PPIAL4GP0DN37 164 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 ZNF766Q5HY98 468 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 OR5B3Q8NH48 314 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 OR4S2Q8NH73 311 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 ROS1P08922 2347 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 K7EN84 100 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 M0R2Z0 102 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 MT-CO2P00403 227 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 PRAMEF5Q5TYX0 476 aa13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 RNASEKQ6P5S7 137 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-202ENST00000369622 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 PRSS57Q6UWY2 283 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 DEFB125Q8N687 156 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 CACNA1GO43497 2377 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 CD1BP29016 333 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 CFAP161Q6P656 301 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 HINT2Q9BX68 163 aa13.19□□□□□ -0.3
SYNCRIP-202ENST00000369622 SPAARA0A1B0GVQ0 90 aa13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 CA1P00915 261 aaPredicted RBP13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 GPR12P47775 334 aa13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 LGALS4P56470 323 aa13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 OR4A5Q8NH83 315 aa13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 SSMEM1Q8WWF3 244 aa13.18□□□□□ -0.3
SYNCRIP-202ENST00000369622 RAB37Q96AX2 223 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms