RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LSM5Q9Y4Y9 91 aaKnown RBP7.02□□□□□ -1.28
SNX27-201ENST00000368838 SRRM4A7MD48 611 aaKnown RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 PMS2P5A8MQ11 134 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 TOX4O94842 621 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 IGHV3-7P01780 117 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 OR9G9P0C7N8 305 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 RAB5CP51148 216 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 HBG1P69891 147 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 HBG2P69892 147 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 DEFA6Q01524 100 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 EWSR1Q01844 656 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNX27-201ENST00000368838 VWC2Q2TAL6 325 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 KLK9Q2XQG4 91 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 VMA21Q3ZAQ7 101 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 VMO1Q7Z5L0 202 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 CENPVQ7Z7K6 275 aaPredicted RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 STX12Q86Y82 276 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 MMD2Q8IY49 270 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 Q8N6K4 173 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 OR4A16Q8NH70 328 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 DTD1Q8TEA8 209 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 PINX1Q96BK5 328 aaKnown RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 HARBI1Q96MB7 349 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 GINS3Q9BRX5 216 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 MEGF9Q9H1U4 602 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 ZMAT4Q9H898 229 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 UBQLN2Q9UHD9 624 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 KLK9Q9UKQ9 250 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 TET2Q6N021 2002 aaPredicted RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 BORCS7-ASMTA0A0B4J1R7 106 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 A0A1W2PN81 502 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 FAM181BA6NEQ2 426 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 SAA1P0DJI8 122 aaPredicted RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 CHRNA7P36544 502 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 RPL8P62917 257 aaKnown RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 PRB3Q04118 309 aaPredicted RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 EXOSC2Q13868 293 aaKnown RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 LDLRAD2Q5SZI1 272 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 PDZD9Q8IXQ8 264 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 ZNF114Q8NC26 417 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 OR1L8Q8NGR8 309 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 SAT2Q96F10 170 aaPredicted RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 AJUBAQ96IF1 538 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 RBKSQ9H477 322 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 NDUFA4L2Q9NRX3 87 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 PSENENQ9NZ42 101 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 FBXL17Q9UF56 701 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 TCF19Q9Y242 345 aa7.01□□□□□ -1.29
SNX27-201ENST00000368838 STRAPQ9Y3F4 350 aaKnown RBP7.01□□□□□ -1.29
SNX27-201ENST00000368838 RPS10-NUDT3A0A1W2PQS6 291 aa7□□□□□ -1.29
SNX27-201ENST00000368838 IGSF23A1L1A6 192 aa7□□□□□ -1.29
SNX27-201ENST00000368838 LINC00862A6NCI5 91 aa7□□□□□ -1.29
SNX27-201ENST00000368838 FAM24AA6NFZ4 105 aa7□□□□□ -1.29
SNX27-201ENST00000368838 H7C2Y5 167 aa7□□□□□ -1.29
SNX27-201ENST00000368838 FGF16O43320 207 aa7□□□□□ -1.29
SNX27-201ENST00000368838 SSSCA1O60232 199 aa7□□□□□ -1.29
SNX27-201ENST00000368838 MOSP00540 346 aa7□□□□□ -1.29
SNX27-201ENST00000368838 CFDP00746 253 aaPredicted RBP7□□□□□ -1.29
SNX27-201ENST00000368838 BRS3P32247 399 aa7□□□□□ -1.29
SNX27-201ENST00000368838 HTR2BP41595 481 aa7□□□□□ -1.29
SNX27-201ENST00000368838 CAV2P51636 162 aa7□□□□□ -1.29
SNX27-201ENST00000368838 DIAPH2-AS1Q14236 149 aa7□□□□□ -1.29
SNX27-201ENST00000368838 MRGPRG-AS1Q2M3A8 158 aa7□□□□□ -1.29
SNX27-201ENST00000368838 C2orf83Q53S99 150 aa7□□□□□ -1.29
SNX27-201ENST00000368838 OR2B11Q5JQS5 317 aa7□□□□□ -1.29
SNX27-201ENST00000368838 OR2T10Q8NGZ9 312 aa7□□□□□ -1.29
SNX27-201ENST00000368838 GNPNAT1Q96EK6 184 aaPredicted RBP7□□□□□ -1.29
SNX27-201ENST00000368838 CLCC1Q96S66 551 aa7□□□□□ -1.29
SNX27-201ENST00000368838 PSMG3Q9BT73 122 aaPredicted RBP7□□□□□ -1.29
SNX27-201ENST00000368838 ZNF471Q9BX82 626 aaPredicted RBP7□□□□□ -1.29
SNX27-201ENST00000368838 SIRT7Q9NRC8 400 aa7□□□□□ -1.29
SNX27-201ENST00000368838 ZNRD1Q9P1U0 126 aa7□□□□□ -1.29
SNX27-201ENST00000368838 TIMM9Q9Y5J7 89 aa7□□□□□ -1.29
SNX27-201ENST00000368838 TNCP24821 2201 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 CENPVL3A0A0U1RRI6 287 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 TEX50A0A1B0GTY4 177 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 NUDT19A8MXV4 375 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 UMAD1C9J7I0 102 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 PRSS46E5RG02 174 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 H3BS24 57 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 RRHO14718 337 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 MPDU1O75352 247 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 SNRNP70P08621 437 aaKnown RBP6.99□□□□□ -1.29
SNX27-201ENST00000368838 SPP1P10451 314 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 COX7A1P24310 79 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 DLX1P56177 255 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 LGALS4P56470 323 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 RPS16P62249 146 aaKnown RBP6.99□□□□□ -1.29
SNX27-201ENST00000368838 RPL11P62913 178 aaKnown RBP6.99□□□□□ -1.29
SNX27-201ENST00000368838 SERF2P84101 59 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 NHLH2Q02577 135 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 PSG5Q15238 335 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 PRSS8Q16651 343 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 IZUMO4Q1ZYL8 232 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 C9orf139Q6ZV77 190 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 PPP1R27Q86WC6 154 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 EIF4E3Q8N5X7 224 aaKnown RBP6.99□□□□□ -1.29
SNX27-201ENST00000368838 OR1S2Q8NGQ3 325 aa6.99□□□□□ -1.29
SNX27-201ENST00000368838 OR2G3Q8NGZ4 309 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms