RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 MFAP2P55001 183 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 SCAND1P57086 179 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 ODF3L2Q3SX64 289 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 Q56UQ5 140 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 OR1L8Q8NGR8 309 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 CD300LFQ8TDQ1 290 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 GIMAP1Q8WWP7 306 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 BSCL2Q96G97 398 aaPredicted RBP7.66□□□□□ -1.18
CLRN3-201ENST00000368671 CHRDL1Q9BU40 450 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 IFT46Q9NQC8 304 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 C21orf62Q9NYP8 219 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 EHFQ9NZC4 300 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 NSG2Q9Y328 171 aa7.66□□□□□ -1.18
CLRN3-201ENST00000368671 KLK5Q9Y337 293 aaPredicted RBP7.66□□□□□ -1.18
CLRN3-201ENST00000368671 F11RQ9Y624 299 aaKnown RBP7.66□□□□□ -1.18
CLRN3-201ENST00000368671 A0A0A6YYH2 397 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 A6NJ64 397 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 MARCH11A6NNE9 402 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 RGS13O14921 159 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 GNRHRP30968 328 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 FCGR2BP31994 310 aaPredicted RBP7.65□□□□□ -1.18
CLRN3-201ENST00000368671 G6PCP35575 357 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 LPAR6P43657 344 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 SPSB3Q6PJ21 355 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 HSD17B13Q7Z5P4 300 aaPredicted RBP7.65□□□□□ -1.18
CLRN3-201ENST00000368671 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 TSPAN14Q8NG11 270 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 SCARB1Q8WTV0 552 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 BORCS5Q969J3 196 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 LSM10Q969L4 123 aaKnown RBP7.65□□□□□ -1.18
CLRN3-201ENST00000368671 RNF183Q96D59 192 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 ZNF2Q9BSG1 426 aaPredicted RBP7.65□□□□□ -1.18
CLRN3-201ENST00000368671 OR51B2Q9Y5P1 312 aa7.65□□□□□ -1.18
CLRN3-201ENST00000368671 IGKV3-7A0A075B6H7 116 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 IGHV3-49A0A0A0MS15 119 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 KIR2DL5BA0A0G2JN68 375 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 KIR2DL5BA0A0G2JPC4 375 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 K7EIM0 57 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 K7EMT4 169 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 PGLYRP1O75594 196 aaPredicted RBP7.64□□□□□ -1.19
CLRN3-201ENST00000368671 SNAPC5O75971 98 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 KRASP01116 189 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 PMP2P02689 132 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 FGF2P09038 288 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 F2RP25116 425 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 TFPI2P48307 235 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 RFX2P48378 723 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 ZNF124Q15973 351 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 KIR2DL5AQ8N109 375 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 RPP25LQ8N5L8 163 aaKnown RBP7.64□□□□□ -1.19
CLRN3-201ENST00000368671 TMEM217Q8N7C4 229 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 KIR2DL5BQ8NHK3 375 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 FCAMRQ8WWV6 532 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 GALNT14Q96FL9 552 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 FXYD6Q9H0Q3 95 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 MAP6D1Q9H9H5 199 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 NDUFA4L2Q9NRX3 87 aa7.64□□□□□ -1.19
CLRN3-201ENST00000368671 YIF1AO95070 293 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 NEDD8Q15843 81 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 OR5H2Q8NGV7 314 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 PHLDA1Q8WV24 401 aaPredicted RBP7.63□□□□□ -1.19
CLRN3-201ENST00000368671 MOB3AQ96BX8 217 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 DGCR14Q96DF8 476 aaKnown RBP7.63□□□□□ -1.19
CLRN3-201ENST00000368671 TMEM56Q96MV1 263 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 ATP6V0BQ99437 205 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 RNF2Q99496 336 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 C6orf62Q9GZU0 229 aaPredicted RBP7.63□□□□□ -1.19
CLRN3-201ENST00000368671 Q9H521 79 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 SMPXQ9UHP9 88 aa7.63□□□□□ -1.19
CLRN3-201ENST00000368671 IGHV7-4-1A0A0J9YVY3 117 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 DBX1A6NMT0 343 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 C15orf62A8K5M9 175 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 GPR31O00270 319 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 CHEK1O14757 476 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 NUPL2O15504 423 aaKnown RBP7.62□□□□□ -1.19
CLRN3-201ENST00000368671 XRCC3O43542 346 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 DEDDO75618 318 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
CLRN3-201ENST00000368671 TGFBR1P36897 503 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 TAS2R20P59543 309 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 RELQ04864 619 aaPredicted RBP7.62□□□□□ -1.19
CLRN3-201ENST00000368671 PHLDA2Q53GA4 152 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 DHRS11Q6UWP2 260 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 CMTM1Q8IZ96 169 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 GBGT1Q8N5D6 347 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 TMEM116Q8NCL8 245 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 SLC25A46Q96AG3 418 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 S100A16Q96FQ6 103 aaKnown RBP7.62□□□□□ -1.19
CLRN3-201ENST00000368671 RHPN1-AS1Q9BWJ2 59 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 YTHDF1Q9BYJ9 559 aaKnown RBP7.62□□□□□ -1.19
CLRN3-201ENST00000368671 FKBP11Q9NYL4 201 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 PRNDQ9UKY0 176 aa7.62□□□□□ -1.19
CLRN3-201ENST00000368671 IGHV3OR16-13A0A075B7E8 117 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 IGHV3-74A0A0B4J1X5 117 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 C15orf61A6NNL5 157 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 MPTX1A8MV57 137 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 ATP6V1G2O95670 118 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 IGHV3-48P01763 117 aa7.61□□□□□ -1.19
CLRN3-201ENST00000368671 CTSGP08311 255 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms