RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 MIDNQ504T8 468 aa7.04□□□□□ -1.28
TPM3-213ENST00000368545 CYB5R2Q6BCY4 276 aa7.04□□□□□ -1.28
TPM3-213ENST00000368545 OR13D1Q8NGV5 346 aa7.04□□□□□ -1.28
TPM3-213ENST00000368545 BPESC1Q9GZL8 116 aa7.04□□□□□ -1.28
TPM3-213ENST00000368545 NARFLQ9H6Q4 476 aa7.04□□□□□ -1.28
TPM3-213ENST00000368545 SLC35D1Q9NTN3 355 aa7.04□□□□□ -1.28
TPM3-213ENST00000368545 CRYZL1O95825 349 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 GAPDHP04406 335 aaKnown RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 CT45A6P0DMU7 189 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 CT45A5P0DMU8 189 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 CT45A7P0DMV0 189 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 SLC25A16P16260 332 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 RAB13P51153 203 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 CAV2P51636 162 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 LINC00205P59089 165 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 TNFRSF9Q07011 255 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 LOXL1Q08397 574 aaPredicted RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 POU2AF1Q16633 256 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 IZUMO4Q1ZYL8 232 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 AARDQ4LEZ3 155 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 PDPNQ86YL7 162 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 SCARB1Q8WTV0 552 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 MLST8Q9BVC4 326 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 MAGT1Q9H0U3 335 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 ATRQ13535 2644 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 TMEM89A2RUT3 159 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 CHST1O43916 411 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 JTBO76095 146 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 CFDP00746 253 aaPredicted RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 IGLV1-47P01700 117 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 HTR2BP41595 481 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 UBE2KP61086 200 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 RAB14P61106 215 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 LBHQ53QV2 105 aaPredicted RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 CLEC2AQ6UVW9 174 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 TGIF2LXQ8IUE1 241 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 OSR1Q8TAX0 266 aaPredicted RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 RBM14Q96PK6 669 aaKnown RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 CIB3Q96Q77 187 aaPredicted RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 MRPL20Q9BYC9 149 aaKnown RBP7.03□□□□□ -1.28
TPM3-213ENST00000368545 NPFFR1Q9GZQ6 430 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 ZNRD1Q9P1U0 126 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 KPTNQ9Y664 436 aa7.03□□□□□ -1.28
TPM3-213ENST00000368545 BORCS7-ASMTA0A0B4J1R7 106 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 H0YJW9 148 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 M0QZ24 198 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 RHODO00212 210 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 DEFA6Q01524 100 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 EWSR1Q01844 656 aaKnown RBP eCLIP7.02□□□□□ -1.29
TPM3-213ENST00000368545 STX12Q86Y82 276 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 OR52E5Q8NH55 327 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 OR4A16Q8NH70 328 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 CLDND2Q8NHS1 167 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 BSCL2Q96G97 398 aaPredicted RBP7.02□□□□□ -1.29
TPM3-213ENST00000368545 SMIM8Q96KF7 97 aa7.02□□□□□ -1.29
TPM3-213ENST00000368545 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 FOXH1O75593 365 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 PRTN3P24158 256 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 ZNF266Q14584 549 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 EIF5AL1Q6IS14 154 aaKnown RBP7.01□□□□□ -1.29
TPM3-213ENST00000368545 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 ZNF429Q86V71 674 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 BAP18Q8IXM2 172 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 TMEM252Q8N6L7 170 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 Q8N7P7 452 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 OR11H6Q8NGC7 330 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 OR4C13Q8NGP0 309 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 C10orf105Q8TEF2 133 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 NABP2Q9BQ15 211 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 RBKSQ9H477 322 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 CYTL1Q9NRR1 136 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 PSENENQ9NZ42 101 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 WASHC3Q9Y3C0 194 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 IGHV2-70DA0A0C4DH43 119 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 IGSF23A1L1A6 192 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 FAM24AA6NFZ4 105 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 C15orf61A6NNL5 157 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 H7C2Y5 167 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 OR9G9P0C7N8 305 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 SULT1A1P50225 295 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 PAX9P55771 341 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 SPCS3P61009 180 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 LMO4P61968 165 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 ARF6P62330 175 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 SSX9Q7RTT3 188 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 UBAC2Q8NBM4 344 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 OR4P4Q8NGL7 312 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 VSTM2AQ8TAG5 236 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 RITA1Q96K30 269 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 BET1LQ9NYM9 111 aa7.01□□□□□ -1.29
TPM3-213ENST00000368545 FOXA2Q9Y261 457 aaPredicted RBP7.01□□□□□ -1.29
TPM3-213ENST00000368545 TMEM50AO95807 157 aa7□□□□□ -1.29
TPM3-213ENST00000368545 IGKV1-16P04430 117 aa7□□□□□ -1.29
TPM3-213ENST00000368545 FGF2P09038 288 aa7□□□□□ -1.29
TPM3-213ENST00000368545 IAPPP10997 89 aa7□□□□□ -1.29
TPM3-213ENST00000368545 COX7A1P24310 79 aa7□□□□□ -1.29
TPM3-213ENST00000368545 CEACAM3P40198 252 aa7□□□□□ -1.29
TPM3-213ENST00000368545 HBG1P69891 147 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms