RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MRPL41Q8IXM3 137 aaKnown RBP10.82□□□□□ -0.68
TPM3-211ENST00000368531 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 OR10C1Q96KK4 312 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 SRSF8Q9BRL6 282 aaKnown RBP10.82□□□□□ -0.68
TPM3-211ENST00000368531 RBKSQ9H477 322 aa10.82□□□□□ -0.68
TPM3-211ENST00000368531 ADARB2-AS1A8MUL3 147 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 H3BUA1 57 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 SSNA1O43805 119 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 PITX3O75364 302 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 SCGB1D2O95969 90 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 CRYGCP07315 174 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 SLC25A6P12236 298 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 RHOGP84095 191 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 TNFRSF9Q07011 255 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 IAH1Q2TAA2 248 aaPredicted RBP10.81□□□□□ -0.68
TPM3-211ENST00000368531 HSD17B13Q7Z5P4 300 aaPredicted RBP10.81□□□□□ -0.68
TPM3-211ENST00000368531 OR2C3Q8N628 320 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 ZNF491Q8N8L2 437 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 OR52E5Q8NH55 327 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 MAGT1Q9H0U3 335 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 SLA2Q9H6Q3 261 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 GNB4Q9HAV0 340 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 HEYLQ9NQ87 328 aaPredicted RBP10.81□□□□□ -0.68
TPM3-211ENST00000368531 ZFP57Q9NU63 452 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 FBXL7Q9UJT9 491 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 ALG5Q9Y673 324 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 S4R3C0 116 aa10.81□□□□□ -0.68
TPM3-211ENST00000368531 GOSR2O14653 212 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 NDUFB8O95169 186 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 SIX6O95475 246 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 SNCAP37840 140 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 KIAA0141Q14154 515 aaPredicted RBP10.8□□□□□ -0.68
TPM3-211ENST00000368531 AARDQ4LEZ3 155 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 GSG1LQ6UXU4 331 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 C8orf86Q6ZUL3 223 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 FANCD2OSQ96PS1 177 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 DUX3Q96PT4 197 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 P2RX4Q99571 388 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 HSPB7Q9UBY9 170 aa10.8□□□□□ -0.68
TPM3-211ENST00000368531 F11RQ9Y624 299 aaKnown RBP10.8□□□□□ -0.68
TPM3-211ENST00000368531 IGHV3-21A0A0B4J1V1 117 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 IGHV3-23P01764 117 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 IAPPP10997 89 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 CDX1P47902 265 aaPredicted RBP10.79□□□□□ -0.68
TPM3-211ENST00000368531 MFAP2P55001 183 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 OXA1LQ15070 435 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 ZBTB8BQ8NAP8 495 aaPredicted RBP10.79□□□□□ -0.68
TPM3-211ENST00000368531 MYOZ3Q8TDC0 251 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 DTD1Q8TEA8 209 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 MISP3Q96FF7 219 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 HIPK2Q9H2X6 1198 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 DMRT1Q9Y5R6 373 aa10.79□□□□□ -0.68
TPM3-211ENST00000368531 IGLV11-55A0A075B6I3 123 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 TRBV9A0A0B4J1U6 114 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 A0A0G2JLM5 398 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 ANKRD34BA5PLL1 514 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 WRBO00258 174 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 CYB5BO43169 146 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 MED6O75586 246 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 TSPAN15O95858 294 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 RNASE2P10153 161 aaKnown RBP10.78□□□□□ -0.68
TPM3-211ENST00000368531 HIST1H1BP16401 226 aaKnown RBP10.78□□□□□ -0.68
TPM3-211ENST00000368531 NKX2-1P43699 371 aaPredicted RBP10.78□□□□□ -0.68
TPM3-211ENST00000368531 POLR2GP62487 172 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM3-211ENST00000368531 C15orf32Q32M92 178 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 PDLIM3Q53GG5 364 aaPredicted RBP10.78□□□□□ -0.68
TPM3-211ENST00000368531 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 OR4D5Q8NGN0 318 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 PINX1Q96BK5 328 aaKnown RBP10.78□□□□□ -0.68
TPM3-211ENST00000368531 C2orf50Q96LR7 162 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 MGAT4CQ9UBM8 478 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 CACFD1Q9UGQ2 172 aa10.78□□□□□ -0.68
TPM3-211ENST00000368531 FAM223BA6NKX1 122 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 FAM90A26D6RGX4 464 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 M0QZ24 198 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 SYNGR2O43760 224 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 BRI3O95415 125 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 IFNA10P01566 189 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.69
TPM3-211ENST00000368531 ID3Q02535 119 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 EXOSC2Q13868 293 aaKnown RBP10.77□□□□□ -0.69
TPM3-211ENST00000368531 FAM223AQ8IWN6 122 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 OR1P1Q8NH06 330 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 C4orf3Q8WVX3 66 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 USMG5Q96IX5 58 aa10.77□□□□□ -0.69
TPM3-211ENST00000368531 PAIP2BQ9ULR5 123 aaKnown RBP10.77□□□□□ -0.69
TPM3-211ENST00000368531 MFSD2BA6NFX1 497 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 INS-IGF2F8WCM5 200 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 SSSCA1O60232 199 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 IGHV3-48P01763 117 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 HTR2BP41595 481 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 ZNF114Q8NC26 417 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 SLC24A4Q8NFF2 622 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 THYN1Q9P016 225 aa10.76□□□□□ -0.69
TPM3-211ENST00000368531 LSM5Q9Y4Y9 91 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms