RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 K7EIM0 57 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 FOLR2P14207 255 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 GPR183P32249 361 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 HSPE1P61604 102 aaKnown RBP14.33□□□□□ -0.12
CKS1B-203ENST00000368439 PRCDQ00LT1 54 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 SURF2Q15527 256 aaPredicted RBP14.33□□□□□ -0.12
CKS1B-203ENST00000368439 SP6Q3SY56 376 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 CD300EQ496F6 205 aaPredicted RBP14.33□□□□□ -0.12
CKS1B-203ENST00000368439 LCN12Q6JVE5 192 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 SBSPONQ8IVN8 264 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 OR2C3Q8N628 320 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 CCDC71LQ8N9Z2 235 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 C5orf66Q9H5L9 145 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 ZC4H2Q9NQZ6 224 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 GPR132Q9UNW8 380 aa14.33□□□□□ -0.12
CKS1B-203ENST00000368439 A0A0B4J293 547 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 TMEM213A2RRL7 107 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 FABP12A6NFH5 140 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 A8MZ25 164 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 DEFB114Q30KQ6 69 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 UNQ9165/PRO28630Q6UXU0 137 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 OR51S1Q8NGJ8 323 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 OR1P1Q8NH06 330 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 SCARB1Q8WTV0 552 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 C19orf73Q9NVV2 129 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 SLC2A8Q9NY64 477 aa14.32□□□□□ -0.12
CKS1B-203ENST00000368439 A0A0G2JRQ6 117 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF785A8K8V0 405 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 CYB5BO43169 146 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 TGOLN2O43493 480 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 B3GALNT1O75752 331 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 IGHV4-30-4P0DP06 118 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 CBLN1P23435 193 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 FAM106AQ4KMX7 169 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF114Q8NC26 417 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 OR1L6Q8NGR2 347 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 CACNG8Q8WXS5 425 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 ATP6V0BQ99437 205 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF436Q9C0F3 470 aaPredicted RBP14.31□□□□□ -0.12
CKS1B-203ENST00000368439 U3KQK5 164 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 V9GYH0 126 aa14.31□□□□□ -0.12
CKS1B-203ENST00000368439 STAB2Q8WWQ8 2551 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 IGHV3-21A0A0B4J1V1 117 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 CDS2O95674 445 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 LHFPL5Q8TAF8 219 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 GLYATL2Q8WU03 294 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF414Q96IQ9 312 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 PRRT1Q99946 306 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 TMEM222Q9H0R3 208 aa14.3□□□□□ -0.12
CKS1B-203ENST00000368439 TECRQ9NZ01 308 aaKnown RBP14.3□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF320A2RRD8 509 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 OR2T8A6NH00 312 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 I3L2K1 104 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 OR5AC1P0C628 307 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 C8orf88P0DMB2 117 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 AKR1C2P52895 323 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 TRIM16LQ309B1 348 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 PLET1Q6UQ28 207 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 Q6ZRM9 215 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 TRIM63Q969Q1 353 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 CHRDL1Q9BU40 450 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 NAA60Q9H7X0 242 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 C21orf62Q9NYP8 219 aa14.29□□□□□ -0.12
CKS1B-203ENST00000368439 C14orf166Q9Y224 244 aaKnown RBP14.29□□□□□ -0.12
CKS1B-203ENST00000368439 KMT2CQ8NEZ4 4911 aaKnown RBP14.29□□□□□ -0.12
CKS1B-203ENST00000368439 TENM3Q9P273 2699 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 IGHV3-35A0A0C4DH35 117 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 TEX13DA0A0J9YY54 714 aaPredicted RBP14.28□□□□□ -0.12
CKS1B-203ENST00000368439 CCDC160A6NGH7 325 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 CRYM-AS1A6NIL9 109 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 INS-IGF2F8WCM5 200 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF701M0R085 212 aaPredicted RBP14.28□□□□□ -0.12
CKS1B-203ENST00000368439 ST8SIA3O43173 380 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 ATG12O94817 140 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 ADMP35318 185 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 ZNF79Q15937 498 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 TM4SF20Q53R12 229 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 SPINK9Q5DT21 86 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 SGPP2Q8IWX5 399 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 DYNLRB2Q8TF09 96 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 TMEM230Q96A57 120 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 BSCL2Q96G97 398 aaPredicted RBP14.28□□□□□ -0.12
CKS1B-203ENST00000368439 WWC2-AS2Q96NR7 200 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 MLXQ9UH92 298 aa14.28□□□□□ -0.12
CKS1B-203ENST00000368439 DNAH7Q8WXX0 4024 aa14.27□□□□□ -0.12
CKS1B-203ENST00000368439 KLF9Q13886 244 aaPredicted RBP14.27□□□□□ -0.13
CKS1B-203ENST00000368439 AARDQ4LEZ3 155 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 PVRIGQ6DKI7 326 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 CCDC190Q86UF4 302 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 SELENOHQ8IZQ5 122 aaKnown RBP14.27□□□□□ -0.13
CKS1B-203ENST00000368439 UXS1Q8NBZ7 420 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 TMEM190Q8WZ59 177 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 PLEKHA3Q9HB20 300 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 SELENOKQ9Y6D0 94 aa14.27□□□□□ -0.13
CKS1B-203ENST00000368439 CTSGP08311 255 aa14.26□□□□□ -0.13
CKS1B-203ENST00000368439 FCGR2BP31994 310 aaPredicted RBP14.26□□□□□ -0.13
CKS1B-203ENST00000368439 ELLP55199 621 aaPredicted RBP14.26□□□□□ -0.13
CKS1B-203ENST00000368439 DHODHQ02127 395 aa14.26□□□□□ -0.13
CKS1B-203ENST00000368439 SPSB3Q6PJ21 355 aa14.26□□□□□ -0.13
CKS1B-203ENST00000368439 GTSCR1Q86UQ5 136 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms