RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 HES1Q14469 280 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 C9orf139Q6ZV77 190 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 TMEM217Q8N7C4 229 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 Q8N9W7 124 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 OR8H1Q8NGG4 311 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 OR5C1Q8NGR4 320 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 ZNF471Q9BX82 626 aaPredicted RBP7.53□□□□□ -1.2
VTA1-201ENST00000367621 COMMD5Q9GZQ3 224 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 HEYLQ9NQ87 328 aaPredicted RBP7.53□□□□□ -1.2
VTA1-201ENST00000367621 ZC4H2Q9NQZ6 224 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 STRAPQ9Y3F4 350 aaKnown RBP7.53□□□□□ -1.2
VTA1-201ENST00000367621 NOTCH2Q04721 2471 aa7.53□□□□□ -1.2
VTA1-201ENST00000367621 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.52□□□□□ -1.21e-6■■■■□ 23.5
VTA1-201ENST00000367621 MDFIC2A0A1B0GVS7 189 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 A6NDX4 124 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 AMY1AP04745 511 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.21
VTA1-201ENST00000367621 EGR2P11161 476 aaPredicted RBP7.52□□□□□ -1.21
VTA1-201ENST00000367621 MDKP21741 143 aaPredicted RBP7.52□□□□□ -1.21
VTA1-201ENST00000367621 RPL27AP46776 148 aaKnown RBP7.52□□□□□ -1.21
VTA1-201ENST00000367621 UBA52P62987 128 aaKnown RBP7.52□□□□□ -1.21
VTA1-201ENST00000367621 NDPQ00604 133 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 CLINT1Q14677 625 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 TNXAQ16473 311 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 AANATQ16613 207 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 LRRC75BQ2VPJ9 315 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 DEFB112Q30KQ8 113 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 C2orf83Q53S99 150 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 STX12Q86Y82 276 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 BAP18Q8IXM2 172 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 UBAC2Q8NBM4 344 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 HINT2Q9BX68 163 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 HIPK2Q9H2X6 1198 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 PLEKHA3Q9HB20 300 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 CR1P17927 2039 aa7.52□□□□□ -1.21
VTA1-201ENST00000367621 CD5LO43866 347 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 JTBO76095 146 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 AREGP15514 252 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 MFAP2P55001 183 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 CX3CL1P78423 397 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 SLC38A11Q08AI6 406 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 VWC2Q2TAL6 325 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 ASPHD1Q5U4P2 390 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 OR8G2PQ6IF36 304 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 ALKAL2Q6UX46 152 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 ZNF562Q6V9R5 426 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 ZNF767PQ75MW2 155 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 MRPL41Q8IXM3 137 aaKnown RBP7.51□□□□□ -1.21
VTA1-201ENST00000367621 SLC24A4Q8NFF2 622 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 OR1S2Q8NGQ3 325 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 NANPQ8TBE9 248 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
VTA1-201ENST00000367621 ZNF48Q96MX3 618 aaPredicted RBP7.51□□□□□ -1.21
VTA1-201ENST00000367621 RBM14Q96PK6 669 aaKnown RBP7.51□□□□□ -1.21
VTA1-201ENST00000367621 P2RX4Q99571 388 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 ATP5SQ99766 215 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 SSX3Q99909 188 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 GINS3Q9BRX5 216 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 PRDM13Q9H4Q3 707 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 KIAA1456Q9P272 454 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 FAM96BQ9Y3D0 163 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 FBXO7Q9Y3I1 522 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 DMRT1Q9Y5R6 373 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 RFNGQ9Y644 331 aa7.51□□□□□ -1.21
VTA1-201ENST00000367621 CSPG4Q6UVK1 2322 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 TNCP24821 2201 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 IGHV7-81A0A0B4J1V7 117 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 A0A1W2PN81 502 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 RPS10-NUDT3A0A1W2PQS6 291 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 NCBP2LA6PVI3 153 aaKnown RBP7.5□□□□□ -1.21
VTA1-201ENST00000367621 IFNA10P01566 189 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 HLA-DRB1P01911 266 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 FBP1P09467 338 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 FAM157CP0CG43 387 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 OR13C7P0DN81 318 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 TPT1P13693 172 aaKnown RBP7.5□□□□□ -1.21
VTA1-201ENST00000367621 NPY1RP25929 384 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 CHRNA7P36544 502 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 HTR2BP41595 481 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 ATP5IP56385 69 aaPredicted RBP7.5□□□□□ -1.21
VTA1-201ENST00000367621 GNB1P62873 340 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 SUMO1P63165 101 aaKnown RBP7.5□□□□□ -1.21
VTA1-201ENST00000367621 RPP30P78346 268 aaKnown RBP7.5□□□□□ -1.21
VTA1-201ENST00000367621 FXYD3Q14802 87 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 ETV3LQ6ZN32 361 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 TMEM219Q86XT9 240 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 C5orf56Q8N8D9 126 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 ZNF114Q8NC26 417 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 SCARB1Q8WTV0 552 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 PHYHIPLQ96FC7 376 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 HSPB9Q9BQS6 159 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 ENY2Q9NPA8 101 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 OTOGQ6ZRI0 2925 aa7.5□□□□□ -1.21
VTA1-201ENST00000367621 FLNAP21333 2647 aaKnown RBP7.49□□□□□ -1.21
VTA1-201ENST00000367621 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 TEX15Q9BXT5 2789 aa7.49□□□□□ -1.21
VTA1-201ENST00000367621 SH2D7A6NKC9 451 aaPredicted RBP7.49□□□□□ -1.21
VTA1-201ENST00000367621 LINC01548A6NM66 108 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms