RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
SF3B5-201ENST00000367569 ST8SIA3O43173 380 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 P0C879 139 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 SPNP16150 400 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 FAUP35544 74 aaKnown RBP11.19□□□□□ -0.62
SF3B5-201ENST00000367569 ARL3P36405 182 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 INPP1P49441 399 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 CCR6P51684 374 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 DCTN2Q13561 401 aaKnown RBP11.19□□□□□ -0.62
SF3B5-201ENST00000367569 SLC25A24Q6NUK1 477 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 SELENOHQ8IZQ5 122 aaKnown RBP11.19□□□□□ -0.62
SF3B5-201ENST00000367569 GLYATL2Q8WU03 294 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
SF3B5-201ENST00000367569 A0A0B4J293 547 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 OR2C1O95371 312 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 IGHV3-48P01763 117 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 ETV6P41212 452 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 HOXA1P49639 335 aaPredicted RBP11.18□□□□□ -0.62
SF3B5-201ENST00000367569 AP3S2P59780 193 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 PRCDQ00LT1 54 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 KLF5Q13887 457 aaPredicted RBP11.18□□□□□ -0.62
SF3B5-201ENST00000367569 Q6ZRM9 215 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 SLC35G3Q8N808 338 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 UBAC2Q8NBM4 344 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 OR5B3Q8NH48 314 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 CACNG8Q8WXS5 425 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
SF3B5-201ENST00000367569 MISP3Q96FF7 219 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 OR4C12Q96R67 309 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 PLEKHA3Q9HB20 300 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
SF3B5-201ENST00000367569 DNAH7Q8WXX0 4024 aa11.18□□□□□ -0.62
SF3B5-201ENST00000367569 IFNA17P01571 189 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 HIST1H1BP16401 226 aaKnown RBP11.17□□□□□ -0.62
SF3B5-201ENST00000367569 SUPT4H1P63272 117 aaKnown RBP11.17□□□□□ -0.62
SF3B5-201ENST00000367569 TMEM187Q14656 261 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 THOC7Q6I9Y2 204 aaKnown RBP11.17□□□□□ -0.62
SF3B5-201ENST00000367569 SGPP2Q8IWX5 399 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
SF3B5-201ENST00000367569 TMEM56Q96MV1 263 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
SF3B5-201ENST00000367569 NDUFA13Q9P0J0 144 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 CACNG5Q9UF02 275 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
SF3B5-201ENST00000367569 SORL1Q92673 2214 aa11.17□□□□□ -0.62
SF3B5-201ENST00000367569 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 FGF2P09038 288 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 NHLRC4P0CG21 123 aaPredicted RBP11.16□□□□□ -0.62
SF3B5-201ENST00000367569 IL7P13232 177 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 VAMP1P23763 118 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 HSPE1P61604 102 aaKnown RBP11.16□□□□□ -0.62
SF3B5-201ENST00000367569 CNPY1Q3B7I2 92 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 IL34Q6ZMJ4 242 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 ZNF502Q8TBZ5 544 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 PINX1Q96BK5 328 aaKnown RBP11.16□□□□□ -0.62
SF3B5-201ENST00000367569 GPR146Q96CH1 333 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 FKBP11Q9NYL4 201 aa11.16□□□□□ -0.62
SF3B5-201ENST00000367569 K7EIM0 57 aa11.15□□□□□ -0.62
SF3B5-201ENST00000367569 CDS2O95674 445 aa11.15□□□□□ -0.62
SF3B5-201ENST00000367569 CSN3P07498 182 aa11.15□□□□□ -0.62
SF3B5-201ENST00000367569 DHODHQ02127 395 aa11.15□□□□□ -0.62
SF3B5-201ENST00000367569 PDCD10Q9BUL8 212 aa11.15□□□□□ -0.62
SF3B5-201ENST00000367569 U3KQK5 164 aa11.15□□□□□ -0.62
SF3B5-201ENST00000367569 ZNF320A2RRD8 509 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 IZUMO1RA6ND01 250 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 GGCTO75223 188 aaKnown RBP11.14□□□□□ -0.63
SF3B5-201ENST00000367569 ATG12O94817 140 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 CLEC3BP05452 202 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 Q56UQ5 140 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 LYZL2Q7Z4W2 148 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 HSD17B13Q7Z5P4 300 aaPredicted RBP11.14□□□□□ -0.63
SF3B5-201ENST00000367569 CADM3Q8N126 398 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 CXorf58Q96LI9 332 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 SCGB3A2Q96PL1 93 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 ASCL2Q99929 193 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 FLVCR2Q9UPI3 526 aa11.14□□□□□ -0.63
SF3B5-201ENST00000367569 DYNC2H1Q8NCM8 4307 aaKnown RBP11.13□□□□□ -0.63
SF3B5-201ENST00000367569 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
SF3B5-201ENST00000367569 IGLV1-51P01701 117 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 GP9P14770 177 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 BTCP35070 178 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 INSL3P51460 131 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 PPP1R1AQ13522 171 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 KLK9Q2XQG4 91 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 ANKRD55Q3KP44 614 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 GALNT14Q96FL9 552 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 CHRDL1Q9BU40 450 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 C21orf62Q9NYP8 219 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 THYN1Q9P016 225 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
SF3B5-201ENST00000367569 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms